Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 IML1YJR138W 4755 nt1.08□□□□□ -2.24
VTI1Q04338 EMT1tM(CAU)D 73 nt1.08□□□□□ -2.24
VTI1Q04338 EMT5tM(CAU)J1 73 nt1.08□□□□□ -2.24
VTI1Q04338 EMT3tM(CAU)J2 73 nt1.08□□□□□ -2.24
VTI1Q04338 EMT4tM(CAU)M 73 nt1.08□□□□□ -2.24
VTI1Q04338 EMT2tM(CAU)O2 73 nt1.08□□□□□ -2.24
VTI1Q04338 YHR007C-AYHR007C-A 216 nt1.08□□□□□ -2.24
VTI1Q04338 YML007C-AYML007C-A 111 nt1.08□□□□□ -2.24
VTI1Q04338 YMR242W-AYMR242W-A 90 nt1.08□□□□□ -2.24
VTI1Q04338 SCC2YDR180W 4482 nt1.08□□□□□ -2.24
VTI1Q04338 ZIP2YGL249W 2115 nt1.07□□□□□ -2.24
VTI1Q04338 INP2YMR163C 2118 nt1.07□□□□□ -2.24
VTI1Q04338 YAR029WYAR029W 225 nt1.07□□□□□ -2.24
VTI1Q04338 SCW11YGL028C 1629 nt1.07□□□□□ -2.24
VTI1Q04338 APL2YKL135C 2181 nt1.07□□□□□ -2.24
VTI1Q04338 CDC39YCR093W 6327 nt1.07□□□□□ -2.24
VTI1Q04338 SAS3YBL052C 2496 nt1.07□□□□□ -2.24
VTI1Q04338 MPT5YGL178W 2580 nt1.06□□□□□ -2.24
VTI1Q04338 tV(UAC)BtV(UAC)B 74 nt1.06□□□□□ -2.24
VTI1Q04338 tV(UAC)DtV(UAC)D 74 nt1.06□□□□□ -2.24
VTI1Q04338 HTB2YBL002W 396 nt1.06□□□□□ -2.24
VTI1Q04338 IFH1YLR223C 3258 nt1.06□□□□□ -2.24
VTI1Q04338 NPC2YDL046W 522 nt1.05□□□□□ -2.24
VTI1Q04338 YDL240C-AYDL240C-A 138 nt1.05□□□□□ -2.24
VTI1Q04338 YFL032WYFL032W 321 nt1.05□□□□□ -2.24
VTI1Q04338 YHL046W-AYHL046W-A 327 nt1.05□□□□□ -2.24
VTI1Q04338 YJR011CYJR011C 786 nt1.05□□□□□ -2.24
VTI1Q04338 YOL160WYOL160W 342 nt1.05□□□□□ -2.24
VTI1Q04338 snR36snR36 182 nt1.05□□□□□ -2.24
VTI1Q04338 YPR117WYPR117W 7470 nt1.05□□□□□ -2.24
VTI1Q04338 SLY1YDR189W 2001 nt1.05□□□□□ -2.24
VTI1Q04338 DOP1YDR141C 5097 nt1.04□□□□□ -2.24
VTI1Q04338 SSS1YDR086C 243 nt1.04□□□□□ -2.24
VTI1Q04338 YDR413CYDR413C 576 nt1.04□□□□□ -2.24
VTI1Q04338 RPL38YLR325C 237 nt1.04□□□□□ -2.24
VTI1Q04338 NUP157YER105C 4176 nt1.04□□□□□ -2.24
VTI1Q04338 MAM33YIL070C 801 nt1.03□□□□□ -2.24
VTI1Q04338 YAL063C-AYAL063C-A 291 nt1.03□□□□□ -2.24
VTI1Q04338 RAD34YDR314C 2079 nt1.03□□□□□ -2.25
VTI1Q04338 GEA2YEL022W 4380 nt1.03□□□□□ -2.25
VTI1Q04338 YGR130CYGR130C 2451 nt1.03□□□□□ -2.25
VTI1Q04338 YDR169C-AYDR169C-A 150 nt1.02□□□□□ -2.25
VTI1Q04338 YER097WYER097W 330 nt1.02□□□□□ -2.25
VTI1Q04338 INA22YIR024C 651 nt1.02□□□□□ -2.25
VTI1Q04338 DBP6YNR038W 1890 nt1.02□□□□□ -2.25
VTI1Q04338 YIL115W-AYIL115W-A 372 nt1.01□□□□□ -2.25
VTI1Q04338 YPL038W-AYPL038W-A 192 nt1.01□□□□□ -2.25
VTI1Q04338 LCD1YDR499W 2244 nt1.01□□□□□ -2.25
VTI1Q04338 FIG4YNL325C 2640 nt1.01□□□□□ -2.25
VTI1Q04338 COG4YPR105C 2586 nt1.01□□□□□ -2.25
VTI1Q04338 ALY2YJL084C 3141 nt1□□□□□ -2.25
VTI1Q04338 RIM20YOR275C 1986 nt1□□□□□ -2.25
VTI1Q04338 ANS1YHR126C 480 nt1□□□□□ -2.25
VTI1Q04338 PCC1YKR095W-A 267 nt1□□□□□ -2.25
VTI1Q04338 YPR010C-AYPR010C-A 219 nt1□□□□□ -2.25
VTI1Q04338 YBR200W-AYBR200W-A 165 nt1□□□□□ -2.25
VTI1Q04338 YKL118WYKL118W 312 nt0.99□□□□□ -2.25
VTI1Q04338 TAR1YLR154W-C 375 nt0.99□□□□□ -2.25
VTI1Q04338 YBR206WYBR206W 324 nt0.99□□□□□ -2.25
VTI1Q04338 NIP100YPL174C 2607 nt0.99□□□□□ -2.25
VTI1Q04338 TTI1YKL033W 3117 nt0.98□□□□□ -2.25
VTI1Q04338 YBR221W-AYBR221W-A 105 nt0.98□□□□□ -2.25
VTI1Q04338 YCK3YER123W 1575 nt0.98□□□□□ -2.25
VTI1Q04338 STO1YMR125W 2586 nt0.98□□□□□ -2.25
VTI1Q04338 SLI15YBR156C 2097 nt0.97□□□□□ -2.25
VTI1Q04338 YDR344CYDR344C 444 nt0.97□□□□□ -2.25
VTI1Q04338 PKH2YOL100W 3246 nt0.97□□□□□ -2.25
VTI1Q04338 SET3YKR029C 2256 nt0.96□□□□□ -2.26
VTI1Q04338 snR60snR60 104 nt0.96□□□□□ -2.26
VTI1Q04338 ECM12YHR021W-A 456 nt0.96□□□□□ -2.26
VTI1Q04338 YDL206WYDL206W 2289 nt0.95□□□□□ -2.26
VTI1Q04338 YFL063WYFL063W 456 nt0.95□□□□□ -2.26
VTI1Q04338 YBR064WYBR064W 429 nt0.95□□□□□ -2.26
VTI1Q04338 PAU24YBR301W 363 nt0.95□□□□□ -2.26
VTI1Q04338 YKL136WYKL136W 399 nt0.94□□□□□ -2.26
VTI1Q04338 YDR521WYDR521W 336 nt0.93□□□□□ -2.26
VTI1Q04338 SPO21YOL091W 1830 nt0.93□□□□□ -2.26
VTI1Q04338 MMS4YBR098W 2076 nt0.93□□□□□ -2.26
VTI1Q04338 PDE2YOR360C 1581 nt0.92□□□□□ -2.26
VTI1Q04338 YIL032CYIL032C 357 nt0.92□□□□□ -2.26
VTI1Q04338 YMR193C-AYMR193C-A 387 nt0.92□□□□□ -2.26
VTI1Q04338 YOR108C-AYOR108C-A 210 nt0.92□□□□□ -2.26
VTI1Q04338 YLL007CYLL007C 1998 nt0.92□□□□□ -2.26
VTI1Q04338 SMC1YFL008W 3678 nt0.91□□□□□ -2.26
VTI1Q04338 YDR183C-AYDR183C-A 258 nt0.91□□□□□ -2.26
VTI1Q04338 RKR1YMR247C 4689 nt0.91□□□□□ -2.26
VTI1Q04338 OST1YJL002C 1431 nt0.9□□□□□ -2.26
VTI1Q04338 YAR009CYAR009C 3591 nt0.9□□□□□ -2.26
VTI1Q04338 COG8YML071C 1824 nt0.9□□□□□ -2.27
VTI1Q04338 STE5YDR103W 2754 nt0.9□□□□□ -2.27
VTI1Q04338 YJL120WYJL120W 324 nt0.9□□□□□ -2.27
VTI1Q04338 YOR015WYOR015W 360 nt0.9□□□□□ -2.27
VTI1Q04338 MCM10YIL150C 1716 nt0.89□□□□□ -2.27
VTI1Q04338 RPS25BYLR333C 327 nt0.89□□□□□ -2.27
VTI1Q04338 YMR290W-AYMR290W-A 348 nt0.89□□□□□ -2.27
VTI1Q04338 SGF11YPL047W 300 nt0.89□□□□□ -2.27
VTI1Q04338 HTL1YCR020W-B 237 nt0.88□□□□□ -2.27
VTI1Q04338 ALG13YGL047W 609 nt0.88□□□□□ -2.27
VTI1Q04338 GPG1YGL121C 381 nt0.88□□□□□ -2.27
VTI1Q04338 YOR011W-AYOR011W-A 207 nt0.88□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms