Protein–RNA interactions for Protein: Q03880

PKR1, V-type ATPase assembly factor PKR1, yeastyeast

Known RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PKR1Q03880 YBL008W-AYBL008W-A 240 nt-0.21□□□□□ -2.44
PKR1Q03880 RPB10YOR210W 213 nt-0.21□□□□□ -2.44
PKR1Q03880 LEE1YPL054W 906 nt-0.21□□□□□ -2.44
PKR1Q03880 YPL261CYPL261C 309 nt-0.21□□□□□ -2.44
PKR1Q03880 YPR160W-AYPR160W-A 81 nt-0.21□□□□□ -2.44
PKR1Q03880 snR45snR45 172 nt-0.21□□□□□ -2.44
PKR1Q03880 YFR012W-AYFR012W-A 87 nt-0.22□□□□□ -2.44
PKR1Q03880 MND1YGL183C 660 nt-0.22□□□□□ -2.44
PKR1Q03880 HAL9YOL089C 3093 nt-0.23□□□□□ -2.45
PKR1Q03880 ULI1YFR026C 510 nt-0.23□□□□□ -2.45
PKR1Q03880 YGL230CYGL230C 444 nt-0.23□□□□□ -2.45
PKR1Q03880 COX5BYIL111W 456 nt-0.23□□□□□ -2.45
PKR1Q03880 YAP6YDR259C 1152 nt-0.24□□□□□ -2.45
PKR1Q03880 YDR371C-AYDR371C-A 105 nt-0.24□□□□□ -2.45
PKR1Q03880 YER135CYER135C 393 nt-0.24□□□□□ -2.45
PKR1Q03880 AFB1YLR040C 675 nt-0.24□□□□□ -2.45
PKR1Q03880 YDL187CYDL187C 330 nt-0.26□□□□□ -2.45
PKR1Q03880 YIR044CYIR044C 186 nt-0.26□□□□□ -2.45
PKR1Q03880 snR72snR72 98 nt-0.27□□□□□ -2.45
PKR1Q03880 PAA1YDR071C 576 nt-0.27□□□□□ -2.45
PKR1Q03880 YAL067W-AYAL067W-A 228 nt-0.27□□□□□ -2.45
PKR1Q03880 UBS1YBR165W 834 nt-0.27□□□□□ -2.45
PKR1Q03880 HUR1YGL168W 333 nt-0.28□□□□□ -2.45
PKR1Q03880 RPS26AYGL189C 360 nt-0.28□□□□□ -2.45
PKR1Q03880 YKL202WYKL202W 582 nt-0.28□□□□□ -2.45
PKR1Q03880 PBI2YNL015W 228 nt-0.28□□□□□ -2.45
PKR1Q03880 YER175W-AYER175W-A 165 nt-0.29□□□□□ -2.46
PKR1Q03880 EMC4YGL231C 573 nt-0.29□□□□□ -2.46
PKR1Q03880 YOR186C-AYOR186C-A 210 nt-0.29□□□□□ -2.46
PKR1Q03880 YBR206WYBR206W 324 nt-0.29□□□□□ -2.46
PKR1Q03880 ECM9YKR004C 1134 nt-0.3□□□□□ -2.46
PKR1Q03880 YLR399W-AYLR399W-A 105 nt-0.3□□□□□ -2.46
PKR1Q03880 YMR321CYMR321C 318 nt-0.3□□□□□ -2.46
PKR1Q03880 SPO21YOL091W 1830 nt-0.31□□□□□ -2.46
PKR1Q03880 YIL066W-AYIL066W-A 444 nt-0.31□□□□□ -2.46
PKR1Q03880 NFU1YKL040C 771 nt-0.31□□□□□ -2.46
PKR1Q03880 SNU56YDR240C 1479 nt-0.32□□□□□ -2.46
PKR1Q03880 MAM33YIL070C 801 nt-0.32□□□□□ -2.46
PKR1Q03880 YNL146WYNL146W 303 nt-0.32□□□□□ -2.46
PKR1Q03880 YOL029CYOL029C 606 nt-0.32□□□□□ -2.46
PKR1Q03880 YJR087WYJR087W 351 nt-0.33□□□□□ -2.46
PKR1Q03880 DCP1YOL149W 696 nt-0.33□□□□□ -2.46
PKR1Q03880 YOR345CYOR345C 351 nt-0.33□□□□□ -2.46
PKR1Q03880 SOV1YMR066W 2697 nt-0.33□□□□□ -2.46
PKR1Q03880 YML108WYML108W 318 nt-0.34□□□□□ -2.46
PKR1Q03880 IPP1YBR011C 864 nt-0.34□□□□□ -2.46
PKR1Q03880 YDR210WYDR210W 228 nt-0.35□□□□□ -2.47
PKR1Q03880 QCR9YGR183C 201 nt-0.35□□□□□ -2.47
PKR1Q03880 YAR053WYAR053W 297 nt-0.35□□□□□ -2.47
PKR1Q03880 YGR025WYGR025W 303 nt-0.36□□□□□ -2.47
PKR1Q03880 YKL136WYKL136W 399 nt-0.36□□□□□ -2.47
PKR1Q03880 COY1YKL179C 2040 nt-0.37□□□□□ -2.47
PKR1Q03880 YNL211CYNL211C 261 nt-0.37□□□□□ -2.47
PKR1Q03880 snR51snR51 107 nt-0.37□□□□□ -2.47
PKR1Q03880 NNF2YGR089W 2811 nt-0.37□□□□□ -2.47
PKR1Q03880 YHL046W-AYHL046W-A 327 nt-0.38□□□□□ -2.47
PKR1Q03880 YPL182CYPL182C 384 nt-0.38□□□□□ -2.47
PKR1Q03880 PTP2YOR208W 2253 nt-0.38□□□□□ -2.47
PKR1Q03880 snR8snR8 190 nt-0.39□□□□□ -2.47
PKR1Q03880 YJR011CYJR011C 786 nt-0.39□□□□□ -2.47
PKR1Q03880 YIL029CYIL029C 429 nt-0.4□□□□□ -2.47
PKR1Q03880 YKL023C-AYKL023C-A 228 nt-0.4□□□□□ -2.47
PKR1Q03880 YKL044WYKL044W 321 nt-0.4□□□□□ -2.47
PKR1Q03880 MRPS8YMR158W 468 nt-0.4□□□□□ -2.47
PKR1Q03880 NIP1YMR309C 2439 nt-0.4□□□□□ -2.47
PKR1Q03880 YKU70YMR284W 1809 nt-0.41□□□□□ -2.47
PKR1Q03880 TIM13YGR181W 318 nt-0.41□□□□□ -2.48
PKR1Q03880 RPS20YHL015W 366 nt-0.41□□□□□ -2.48
PKR1Q03880 YLR171WYLR171W 390 nt-0.41□□□□□ -2.48
PKR1Q03880 YOR032W-AYOR032W-A 201 nt-0.42□□□□□ -2.48
PKR1Q03880 snR128snR128 126 nt-0.42□□□□□ -2.48
PKR1Q03880 YCR001WYCR001W 315 nt-0.44□□□□□ -2.48
PKR1Q03880 YCR100CYCR100C 951 nt-0.44□□□□□ -2.48
PKR1Q03880 TFB5YDR079C-A 219 nt-0.44□□□□□ -2.48
PKR1Q03880 SDH7YDR511W 402 nt-0.44□□□□□ -2.48
PKR1Q03880 SBH2YER019C-A 267 nt-0.44□□□□□ -2.48
PKR1Q03880 tN(GUU)QtN(GUU)Q 71 nt-0.46□□□□□ -2.48
PKR1Q03880 NIP100YPL174C 2607 nt-0.47□□□□□ -2.48
PKR1Q03880 BUL2YML111W 2763 nt-0.47□□□□□ -2.49
PKR1Q03880 YOL038C-AYOL038C-A 96 nt-0.48□□□□□ -2.49
PKR1Q03880 YEL073CYEL073C 324 nt-0.49□□□□□ -2.49
PKR1Q03880 TSC3YBR058C-A 243 nt-0.49□□□□□ -2.49
PKR1Q03880 HMLALPHA2YCL067C 633 nt-0.5□□□□□ -2.49
PKR1Q03880 MATALPHA2YCR039C 633 nt-0.5□□□□□ -2.49
PKR1Q03880 ATG31YDR022C 591 nt-0.5□□□□□ -2.49
PKR1Q03880 YAL066WYAL066W 309 nt-0.5□□□□□ -2.49
PKR1Q03880 YLR101CYLR101C 396 nt-0.5□□□□□ -2.49
PKR1Q03880 RAD61YDR014W 1944 nt-0.5□□□□□ -2.49
PKR1Q03880 YDL185C-AYDL185C-A 228 nt-0.51□□□□□ -2.49
PKR1Q03880 YGR164WYGR164W 336 nt-0.51□□□□□ -2.49
PKR1Q03880 YJR141WYJR141W 1044 nt-0.51□□□□□ -2.49
PKR1Q03880 SVS1YPL163C 783 nt-0.51□□□□□ -2.49
PKR1Q03880 RPF1YHR088W 888 nt-0.52□□□□□ -2.49
PKR1Q03880 BER1YLR412W 825 nt-0.53□□□□□ -2.49
PKR1Q03880 YJL007CYJL007C 315 nt-0.54□□□□□ -2.5
PKR1Q03880 SEM1YDR363W-A 270 nt-0.55□□□□□ -2.5
PKR1Q03880 YHR131W-AYHR131W-A 246 nt-0.55□□□□□ -2.5
PKR1Q03880 YJL020W-AYJL020W-A 258 nt-0.55□□□□□ -2.5
PKR1Q03880 PRP39YML046W 1890 nt-0.55□□□□□ -2.5
PKR1Q03880 SEC10YLR166C 2616 nt-0.56□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 93.3 ms