Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H1AQ02539 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 AC092720.2-201ENST00000602388 1665 ntBASIC15.3■□□□□ 0.04
HIST1H1AQ02539 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H1AQ02539 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 KRT19P1-201ENST00000405746 1186 ntBASIC15.29■□□□□ 0.04
HIST1H1AQ02539 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1AQ02539 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 AL512408.1-201ENST00000569378 2000 ntBASIC15.28■□□□□ 0.04
HIST1H1AQ02539 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1AQ02539 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms