Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HMGCS1Q01581 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS1Q01581 AC068338.2-201ENST00000563278 1430 ntBASIC19.34■□□□□ 0.69
HMGCS1Q01581 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS1Q01581 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS1Q01581 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS1Q01581 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS1Q01581 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS1Q01581 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS1Q01581 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 AC006015.1-201ENST00000429970 570 ntBASIC19.33■□□□□ 0.68
HMGCS1Q01581 RARRES2P4-201ENST00000514074 484 ntBASIC19.33■□□□□ 0.68
HMGCS1Q01581 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS1Q01581 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS1Q01581 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS1Q01581 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS1Q01581 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS1Q01581 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS1Q01581 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS1Q01581 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS1Q01581 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.33■□□□□ 0.68
HMGCS1Q01581 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HMGCS1Q01581 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCS1Q01581 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCS1Q01581 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCS1Q01581 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
HMGCS1Q01581 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCS1Q01581 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HMGCS1Q01581 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCS1Q01581 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCS1Q01581 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCS1Q01581 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCS1Q01581 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.31■□□□□ 0.68
HMGCS1Q01581 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.31■□□□□ 0.68
HMGCS1Q01581 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGCS1Q01581 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HMGCS1Q01581 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.31■□□□□ 0.68
HMGCS1Q01581 AL158211.5-201ENST00000623583 2518 ntBASIC19.31■□□□□ 0.68
HMGCS1Q01581 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
HMGCS1Q01581 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCS1Q01581 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGCS1Q01581 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCS1Q01581 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCS1Q01581 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HMGCS1Q01581 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCS1Q01581 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HMGCS1Q01581 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
HMGCS1Q01581 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCS1Q01581 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HMGCS1Q01581 AC092666.2-201ENST00000613287 246 ntBASIC19.3■□□□□ 0.68
HMGCS1Q01581 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCS1Q01581 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCS1Q01581 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCS1Q01581 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms