Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 AL136162.1-201ENST00000607711 1078 ntBASIC18.32■□□□□ 0.52
CDC42P60953 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.32■□□□□ 0.52
CDC42P60953 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDC42P60953 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.32■□□□□ 0.52
CDC42P60953 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.32■□□□□ 0.52
CDC42P60953 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.32■□□□□ 0.52
CDC42P60953 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42P60953 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.32■□□□□ 0.52
CDC42P60953 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.31■□□□□ 0.52
CDC42P60953 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.31■□□□□ 0.52
CDC42P60953 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDC42P60953 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.31■□□□□ 0.52
CDC42P60953 AC135279.3-201ENST00000610945 1311 ntBASIC18.31■□□□□ 0.52
CDC42P60953 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDC42P60953 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 AC027682.1-201ENST00000562846 899 ntBASIC18.31■□□□□ 0.52
CDC42P60953 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.31■□□□□ 0.52
CDC42P60953 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDC42P60953 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDC42P60953 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42P60953 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.31■□□□□ 0.52
CDC42P60953 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.31■□□□□ 0.52
CDC42P60953 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDC42P60953 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42P60953 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDC42P60953 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42P60953 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CDC42P60953 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42P60953 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDC42P60953 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDC42P60953 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42P60953 AC090340.1-201ENST00000620778 4980 ntBASIC18.3■□□□□ 0.52
CDC42P60953 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42P60953 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.3■□□□□ 0.52
CDC42P60953 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42P60953 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.3■□□□□ 0.52
CDC42P60953 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC42P60953 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDC42P60953 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDC42P60953 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDC42P60953 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42P60953 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42P60953 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDC42P60953 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.3■□□□□ 0.52
CDC42P60953 TREX1-205ENST00000625293 1783 ntBASIC18.3■□□□□ 0.52
CDC42P60953 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.29■□□□□ 0.52
CDC42P60953 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.29■□□□□ 0.52
CDC42P60953 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC42P60953 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.29■□□□□ 0.52
CDC42P60953 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC42P60953 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDC42P60953 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDC42P60953 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.29■□□□□ 0.52
CDC42P60953 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.29■□□□□ 0.52
CDC42P60953 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDC42P60953 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.29■□□□□ 0.52
CDC42P60953 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDC42P60953 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDC42P60953 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC42P60953 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDC42P60953 KRT8P36-201ENST00000489121 1440 ntBASIC18.29■□□□□ 0.52
CDC42P60953 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDC42P60953 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDC42P60953 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC42P60953 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC42P60953 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC42P60953 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC42P60953 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC42P60953 KRT87P-202ENST00000534226 1464 ntBASIC18.28■□□□□ 0.52
CDC42P60953 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CDC42P60953 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC42P60953 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CDC42P60953 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.28■□□□□ 0.52
CDC42P60953 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC42P60953 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDC42P60953 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC42P60953 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.28■□□□□ 0.52
CDC42P60953 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.28■□□□□ 0.52
CDC42P60953 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CDC42P60953 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms