Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.31■□□□□ 0.84
WNT3AP56704 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.31■□□□□ 0.84
WNT3AP56704 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.31■□□□□ 0.84
WNT3AP56704 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
WNT3AP56704 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3AP56704 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
WNT3AP56704 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3AP56704 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.31■□□□□ 0.84
WNT3AP56704 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
WNT3AP56704 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
WNT3AP56704 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3AP56704 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3AP56704 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.31■□□□□ 0.84
WNT3AP56704 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.31■□□□□ 0.84
WNT3AP56704 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.3■□□□□ 0.84
WNT3AP56704 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
WNT3AP56704 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.3■□□□□ 0.84
WNT3AP56704 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.3■□□□□ 0.84
WNT3AP56704 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.3■□□□□ 0.84
WNT3AP56704 AC092118.2-201ENST00000613495 667 ntBASIC20.3■□□□□ 0.84
WNT3AP56704 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.3■□□□□ 0.84
WNT3AP56704 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
WNT3AP56704 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.3■□□□□ 0.84
WNT3AP56704 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3AP56704 TCF3P1-201ENST00000423021 1937 ntBASIC20.29■□□□□ 0.84
WNT3AP56704 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.29■□□□□ 0.84
WNT3AP56704 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.29■□□□□ 0.84
WNT3AP56704 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.29■□□□□ 0.84
WNT3AP56704 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
WNT3AP56704 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3AP56704 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3AP56704 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3AP56704 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3AP56704 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3AP56704 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3AP56704 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.29■□□□□ 0.84
WNT3AP56704 AL109923.1-201ENST00000618799 583 ntBASIC20.29■□□□□ 0.84
WNT3AP56704 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.29■□□□□ 0.84
WNT3AP56704 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.29■□□□□ 0.84
WNT3AP56704 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
WNT3AP56704 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3AP56704 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
WNT3AP56704 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
WNT3AP56704 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.29■□□□□ 0.84
WNT3AP56704 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3AP56704 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3AP56704 KRT8P17-201ENST00000453110 1448 ntBASIC20.28■□□□□ 0.84
WNT3AP56704 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.28■□□□□ 0.84
WNT3AP56704 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.28■□□□□ 0.84
WNT3AP56704 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3AP56704 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3AP56704 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.28■□□□□ 0.84
WNT3AP56704 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3AP56704 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.28■□□□□ 0.84
WNT3AP56704 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
WNT3AP56704 DUSP5P2-201ENST00000426873 1033 ntBASIC20.28■□□□□ 0.84
WNT3AP56704 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.28■□□□□ 0.84
WNT3AP56704 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.28■□□□□ 0.84
WNT3AP56704 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.28■□□□□ 0.84
WNT3AP56704 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.28■□□□□ 0.84
WNT3AP56704 AL031963.3-201ENST00000606441 850 ntBASIC20.28■□□□□ 0.84
WNT3AP56704 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.28■□□□□ 0.84
WNT3AP56704 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.28■□□□□ 0.84
WNT3AP56704 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3AP56704 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3AP56704 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3AP56704 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3AP56704 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
WNT3AP56704 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
WNT3AP56704 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
WNT3AP56704 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
WNT3AP56704 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
WNT3AP56704 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
WNT3AP56704 SLC25A24-204ENST00000569674 2357 ntBASIC20.27■□□□□ 0.84
WNT3AP56704 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
WNT3AP56704 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.27■□□□□ 0.84
WNT3AP56704 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
WNT3AP56704 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
WNT3AP56704 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
WNT3AP56704 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.27■□□□□ 0.84
WNT3AP56704 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
WNT3AP56704 AL138781.1-201ENST00000566567 1274 ntBASIC20.27■□□□□ 0.84
WNT3AP56704 MIR4758-201ENST00000577688 71 ntBASIC20.27■□□□□ 0.84
WNT3AP56704 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
WNT3AP56704 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
WNT3AP56704 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms