Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH8P55286 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH8P55286 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH8P55286 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH8P55286 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH8P55286 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH8P55286 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH8P55286 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH8P55286 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDH8P55286 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH8P55286 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.44■■□□□ 1.02
CDH8P55286 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH8P55286 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH8P55286 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH8P55286 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH8P55286 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
CDH8P55286 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.44■■□□□ 1.02
CDH8P55286 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH8P55286 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH8P55286 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH8P55286 SOX15-203ENST00000570788 1093 ntBASIC21.44■■□□□ 1.02
CDH8P55286 AC008403.3-201ENST00000598924 454 ntBASIC21.44■■□□□ 1.02
CDH8P55286 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDH8P55286 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH8P55286 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.44■■□□□ 1.02
CDH8P55286 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH8P55286 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH8P55286 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH8P55286 KRT8P17-201ENST00000453110 1448 ntBASIC21.44■■□□□ 1.02
CDH8P55286 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH8P55286 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH8P55286 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH8P55286 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH8P55286 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CDH8P55286 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH8P55286 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH8P55286 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CDH8P55286 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH8P55286 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDH8P55286 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.43■■□□□ 1.02
CDH8P55286 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH8P55286 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH8P55286 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.43■■□□□ 1.02
CDH8P55286 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH8P55286 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH8P55286 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH8P55286 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH8P55286 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.43■■□□□ 1.02
CDH8P55286 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.42■■□□□ 1.02
CDH8P55286 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDH8P55286 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
CDH8P55286 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH8P55286 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH8P55286 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH8P55286 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH8P55286 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH8P55286 UNC93B4-201ENST00000505679 747 ntBASIC21.42■■□□□ 1.02
CDH8P55286 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CDH8P55286 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.42■■□□□ 1.02
CDH8P55286 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDH8P55286 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.42■■□□□ 1.02
CDH8P55286 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 AL031963.3-201ENST00000606441 850 ntBASIC21.42■■□□□ 1.02
CDH8P55286 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH8P55286 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.41■■□□□ 1.02
CDH8P55286 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.41■■□□□ 1.02
CDH8P55286 KRT8P20-201ENST00000423953 1409 ntBASIC21.41■■□□□ 1.02
CDH8P55286 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH8P55286 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.41■■□□□ 1.02
CDH8P55286 ESRRAP1-201ENST00000400596 1257 ntBASIC21.41■■□□□ 1.02
CDH8P55286 AL390719.1-204ENST00000412397 1219 ntBASIC21.41■■□□□ 1.02
CDH8P55286 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.41■■□□□ 1.02
CDH8P55286 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.41■■□□□ 1.02
CDH8P55286 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.41■■□□□ 1.02
CDH8P55286 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.41■■□□□ 1.02
CDH8P55286 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDH8P55286 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.41■■□□□ 1.02
CDH8P55286 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.41■■□□□ 1.02
CDH8P55286 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH8P55286 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH8P55286 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.41■■□□□ 1.02
CDH8P55286 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH8P55286 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH8P55286 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH8P55286 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.4■■□□□ 1.02
CDH8P55286 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH8P55286 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
CDH8P55286 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH8P55286 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms