Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.73□□□□□ -0.05
APOC4P55056 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.73□□□□□ -0.05
APOC4P55056 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.73□□□□□ -0.05
APOC4P55056 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.73□□□□□ -0.05
APOC4P55056 RN7SL471P-201ENST00000580476 299 ntBASIC14.73□□□□□ -0.05
APOC4P55056 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.73□□□□□ -0.05
APOC4P55056 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 FP700111.2-201ENST00000619190 1892 ntBASIC14.72□□□□□ -0.05
APOC4P55056 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
APOC4P55056 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC4P55056 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.72□□□□□ -0.05
APOC4P55056 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC4P55056 RPS2P52-201ENST00000469610 820 ntBASIC14.72□□□□□ -0.05
APOC4P55056 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.72□□□□□ -0.05
APOC4P55056 AC093827.2-201ENST00000512654 315 ntBASIC14.72□□□□□ -0.05
APOC4P55056 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
APOC4P55056 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.72□□□□□ -0.05
APOC4P55056 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.72□□□□□ -0.05
APOC4P55056 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
APOC4P55056 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.72□□□□□ -0.05
APOC4P55056 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 KRT8P20-201ENST00000423953 1409 ntBASIC14.72□□□□□ -0.05
APOC4P55056 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.72□□□□□ -0.05
APOC4P55056 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
APOC4P55056 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
APOC4P55056 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOC4P55056 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC4P55056 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC4P55056 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC4P55056 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC4P55056 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC4P55056 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
APOC4P55056 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
APOC4P55056 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC4P55056 AC239809.2-201ENST00000415381 517 ntBASIC14.71□□□□□ -0.05
APOC4P55056 RPPH1-201ENST00000516869 333 ntBASIC14.71□□□□□ -0.05
APOC4P55056 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.71□□□□□ -0.05
APOC4P55056 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC4P55056 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC4P55056 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC4P55056 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.71□□□□□ -0.05
APOC4P55056 AL359736.2-201ENST00000621992 437 ntBASIC14.71□□□□□ -0.05
APOC4P55056 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC4P55056 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC4P55056 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC4P55056 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
APOC4P55056 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC4P55056 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC4P55056 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC4P55056 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC4P55056 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
APOC4P55056 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
APOC4P55056 AF106564.1-201ENST00000607058 2553 ntBASIC14.71□□□□□ -0.06
APOC4P55056 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
APOC4P55056 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC4P55056 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC4P55056 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
APOC4P55056 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC4P55056 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC4P55056 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC4P55056 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC4P55056 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC4P55056 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC4P55056 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
APOC4P55056 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC4P55056 MIR718-201ENST00000390190 70 ntBASIC14.7□□□□□ -0.06
APOC4P55056 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
APOC4P55056 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.7□□□□□ -0.06
APOC4P55056 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms