Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NR1H2P55055 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H2P55055 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H2P55055 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H2P55055 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NR1H2P55055 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NR1H2P55055 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H2P55055 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.96■□□□□ 0.63
NR1H2P55055 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H2P55055 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.96■□□□□ 0.63
NR1H2P55055 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.96■□□□□ 0.63
NR1H2P55055 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NR1H2P55055 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H2P55055 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H2P55055 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H2P55055 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H2P55055 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NR1H2P55055 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.96■□□□□ 0.63
NR1H2P55055 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H2P55055 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H2P55055 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H2P55055 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H2P55055 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H2P55055 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H2P55055 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.95■□□□□ 0.62
NR1H2P55055 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NR1H2P55055 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.95■□□□□ 0.62
NR1H2P55055 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.95■□□□□ 0.62
NR1H2P55055 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NR1H2P55055 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.95■□□□□ 0.62
NR1H2P55055 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NR1H2P55055 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.94■□□□□ 0.62
NR1H2P55055 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
NR1H2P55055 AC004911.1-201ENST00000416316 871 ntBASIC18.94■□□□□ 0.62
NR1H2P55055 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.94■□□□□ 0.62
NR1H2P55055 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.94■□□□□ 0.62
NR1H2P55055 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.94■□□□□ 0.62
NR1H2P55055 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.94■□□□□ 0.62
NR1H2P55055 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NR1H2P55055 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NR1H2P55055 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NR1H2P55055 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NR1H2P55055 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NR1H2P55055 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
NR1H2P55055 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NR1H2P55055 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H2P55055 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.93■□□□□ 0.62
NR1H2P55055 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H2P55055 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.93■□□□□ 0.62
NR1H2P55055 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H2P55055 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.93■□□□□ 0.62
NR1H2P55055 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H2P55055 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H2P55055 BX005040.4-201ENST00000637145 1518 ntBASIC18.93■□□□□ 0.62
NR1H2P55055 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NR1H2P55055 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H2P55055 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H2P55055 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NR1H2P55055 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.93■□□□□ 0.62
NR1H2P55055 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NR1H2P55055 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.92■□□□□ 0.62
NR1H2P55055 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.92■□□□□ 0.62
NR1H2P55055 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NR1H2P55055 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NR1H2P55055 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
NR1H2P55055 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.92■□□□□ 0.62
NR1H2P55055 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NR1H2P55055 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.92■□□□□ 0.62
NR1H2P55055 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.92■□□□□ 0.62
NR1H2P55055 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.92■□□□□ 0.62
NR1H2P55055 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.92■□□□□ 0.62
NR1H2P55055 AC092437.1-201ENST00000624794 1048 ntBASIC18.92■□□□□ 0.62
NR1H2P55055 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NR1H2P55055 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
NR1H2P55055 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms