Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 MAM33YIL070C 801 nt1.01□□□□□ -2.25
VPS9P54787 YOR072W-AYOR072W-A 249 nt1.01□□□□□ -2.25
VPS9P54787 PAN2YGL094C 3348 nt1.01□□□□□ -2.25
VPS9P54787 RIM20YOR275C 1986 nt1□□□□□ -2.25
VPS9P54787 YML007C-AYML007C-A 111 nt1□□□□□ -2.25
VPS9P54787 YPR002C-AYPR002C-A 198 nt1□□□□□ -2.25
VPS9P54787 YBR285WYBR285W 435 nt1□□□□□ -2.25
VPS9P54787 NIP100YPL174C 2607 nt0.99□□□□□ -2.25
VPS9P54787 YHL042WYHL042W 453 nt0.98□□□□□ -2.25
VPS9P54787 YIR044CYIR044C 186 nt0.98□□□□□ -2.25
VPS9P54787 YJR011CYJR011C 786 nt0.98□□□□□ -2.25
VPS9P54787 RKR1YMR247C 4689 nt0.97□□□□□ -2.25
VPS9P54787 YHR138CYHR138C 345 nt0.97□□□□□ -2.25
VPS9P54787 BSC3YLR465C 309 nt0.97□□□□□ -2.25
VPS9P54787 CUL3YGR003W 2235 nt0.97□□□□□ -2.25
VPS9P54787 YDR426CYDR426C 378 nt0.95□□□□□ -2.26
VPS9P54787 YDR521WYDR521W 336 nt0.95□□□□□ -2.26
VPS9P54787 YER137W-AYER137W-A 306 nt0.95□□□□□ -2.26
VPS9P54787 YOR053WYOR053W 342 nt0.95□□□□□ -2.26
VPS9P54787 LEE1YPL054W 906 nt0.95□□□□□ -2.26
VPS9P54787 YPR117WYPR117W 7470 nt0.94□□□□□ -2.26
VPS9P54787 YLL007CYLL007C 1998 nt0.94□□□□□ -2.26
VPS9P54787 BEM2YER155C 6504 nt0.94□□□□□ -2.26
VPS9P54787 UBP3YER151C 2739 nt0.93□□□□□ -2.26
VPS9P54787 YDL073WYDL073W 2955 nt0.93□□□□□ -2.26
VPS9P54787 YLR222C-AYLR222C-A 231 nt0.93□□□□□ -2.26
VPS9P54787 YBR064WYBR064W 429 nt0.93□□□□□ -2.26
VPS9P54787 YBR206WYBR206W 324 nt0.93□□□□□ -2.26
VPS9P54787 SMC1YFL008W 3678 nt0.93□□□□□ -2.26
VPS9P54787 BUD3YCL014W 4911 nt0.93□□□□□ -2.26
VPS9P54787 SCC2YDR180W 4482 nt0.92□□□□□ -2.26
VPS9P54787 CSN9YDR179C 489 nt0.92□□□□□ -2.26
VPS9P54787 YMR001C-AYMR001C-A 231 nt0.91□□□□□ -2.26
VPS9P54787 PAU24YBR301W 363 nt0.91□□□□□ -2.26
VPS9P54787 DBP6YNR038W 1890 nt0.9□□□□□ -2.26
VPS9P54787 ALG13YGL047W 609 nt0.9□□□□□ -2.27
VPS9P54787 PCC1YKR095W-A 267 nt0.9□□□□□ -2.27
VPS9P54787 BFR2YDR299W 1605 nt0.89□□□□□ -2.27
VPS9P54787 ISD11YER048W-A 285 nt0.89□□□□□ -2.27
VPS9P54787 STF2YGR008C 255 nt0.89□□□□□ -2.27
VPS9P54787 IES4YOR189W 351 nt0.89□□□□□ -2.27
VPS9P54787 PTP2YOR208W 2253 nt0.89□□□□□ -2.27
VPS9P54787 YDR344CYDR344C 444 nt0.88□□□□□ -2.27
VPS9P54787 YOR121CYOR121C 306 nt0.88□□□□□ -2.27
VPS9P54787 PAM16YJL104W 450 nt0.87□□□□□ -2.27
VPS9P54787 HUG1YML058W-A 207 nt0.86□□□□□ -2.27
VPS9P54787 YOR293C-AYOR293C-A 150 nt0.86□□□□□ -2.27
VPS9P54787 MCM10YIL150C 1716 nt0.86□□□□□ -2.27
VPS9P54787 DOP1YDR141C 5097 nt0.85□□□□□ -2.27
VPS9P54787 OLI1Q0130 231 nt0.85□□□□□ -2.27
VPS9P54787 YCK3YER123W 1575 nt0.84□□□□□ -2.27
VPS9P54787 YAL068W-AYAL068W-A 255 nt0.84□□□□□ -2.27
VPS9P54787 PMP1YCR024C-A 123 nt0.83□□□□□ -2.28
VPS9P54787 YLR154W-FYLR154W-F 141 nt0.83□□□□□ -2.28
VPS9P54787 SEC1YDR164C 2175 nt0.83□□□□□ -2.28
VPS9P54787 VAR1Q0140 1197 nt0.82□□□□□ -2.28
VPS9P54787 ECM12YHR021W-A 456 nt0.82□□□□□ -2.28
VPS9P54787 YIL142C-AYIL142C-A 333 nt0.82□□□□□ -2.28
VPS9P54787 YOR282WYOR282W 321 nt0.82□□□□□ -2.28
VPS9P54787 NOP9YJL010C 2001 nt0.82□□□□□ -2.28
VPS9P54787 tW(UCA)QtW(UCA)Q 74 nt0.81□□□□□ -2.28
VPS9P54787 YLR334CYLR334C 381 nt0.81□□□□□ -2.28
VPS9P54787 YOR029WYOR029W 336 nt0.81□□□□□ -2.28
VPS9P54787 YPL044CYPL044C 549 nt0.81□□□□□ -2.28
VPS9P54787 YAR029WYAR029W 225 nt0.8□□□□□ -2.28
VPS9P54787 YAR053WYAR053W 297 nt0.8□□□□□ -2.28
VPS9P54787 YHR063W-AYHR063W-A 336 nt0.79□□□□□ -2.28
VPS9P54787 PRP16YKR086W 3216 nt0.79□□□□□ -2.28
VPS9P54787 RPL35AYDL191W 363 nt0.78□□□□□ -2.28
VPS9P54787 CMC4YMR194C-B 222 nt0.78□□□□□ -2.28
VPS9P54787 NHP2YDL208W 471 nt0.77□□□□□ -2.29
VPS9P54787 OST1YJL002C 1431 nt0.77□□□□□ -2.29
VPS9P54787 HMRA2YCR096C 360 nt0.76□□□□□ -2.29
VPS9P54787 YFR012W-AYFR012W-A 87 nt0.76□□□□□ -2.29
VPS9P54787 CHS6YJL099W 2241 nt0.75□□□□□ -2.29
VPS9P54787 YJL120WYJL120W 324 nt0.75□□□□□ -2.29
VPS9P54787 YOR011W-AYOR011W-A 207 nt0.75□□□□□ -2.29
VPS9P54787 RPS30BYOR182C 192 nt0.75□□□□□ -2.29
VPS9P54787 ASE1YOR058C 2658 nt0.75□□□□□ -2.29
VPS9P54787 NPR2YEL062W 1848 nt0.74□□□□□ -2.29
VPS9P54787 RPS25BYLR333C 327 nt0.74□□□□□ -2.29
VPS9P54787 HTB2YBL002W 396 nt0.73□□□□□ -2.29
VPS9P54787 YNL211CYNL211C 261 nt0.73□□□□□ -2.29
VPS9P54787 SPO21YOL091W 1830 nt0.73□□□□□ -2.29
VPS9P54787 YGR035CYGR035C 351 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
VPS9P54787 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
VPS9P54787 YPL225WYPL225W 441 nt0.72□□□□□ -2.29
VPS9P54787 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
VPS9P54787 LTE1YAL024C 4308 nt0.72□□□□□ -2.29
VPS9P54787 YDR157WYDR157W 402 nt0.71□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 62 ms