Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 RIM20YOR275C 1986 nt0.88□□□□□ -2.27
SSU72P53538 RAD34YDR314C 2079 nt0.87□□□□□ -2.27
SSU72P53538 YDR426CYDR426C 378 nt0.87□□□□□ -2.27
SSU72P53538 STB6YKL072W 2301 nt0.87□□□□□ -2.27
SSU72P53538 MMS4YBR098W 2076 nt0.86□□□□□ -2.27
SSU72P53538 PCC1YKR095W-A 267 nt0.86□□□□□ -2.27
SSU72P53538 YLR334CYLR334C 381 nt0.86□□□□□ -2.27
SSU72P53538 BIL1YOR304C-A 231 nt0.86□□□□□ -2.27
SSU72P53538 ALY2YJL084C 3141 nt0.86□□□□□ -2.27
SSU72P53538 COG4YPR105C 2586 nt0.86□□□□□ -2.27
SSU72P53538 APL3YBL037W 3078 nt0.85□□□□□ -2.27
SSU72P53538 CSN9YDR179C 489 nt0.85□□□□□ -2.27
SSU72P53538 NUP145YGL092W 3954 nt0.85□□□□□ -2.27
SSU72P53538 YBR012CYBR012C 420 nt0.85□□□□□ -2.27
SSU72P53538 FIG4YNL325C 2640 nt0.85□□□□□ -2.27
SSU72P53538 tW(UCA)QtW(UCA)Q 74 nt0.84□□□□□ -2.27
SSU72P53538 NIP100YPL174C 2607 nt0.84□□□□□ -2.28
SSU72P53538 SET3YKR029C 2256 nt0.84□□□□□ -2.28
SSU72P53538 PKH2YOL100W 3246 nt0.83□□□□□ -2.28
SSU72P53538 SCC2YDR180W 4482 nt0.83□□□□□ -2.28
SSU72P53538 CDC39YCR093W 6327 nt0.83□□□□□ -2.28
SSU72P53538 MAM33YIL070C 801 nt0.83□□□□□ -2.28
SSU72P53538 YIR044CYIR044C 186 nt0.83□□□□□ -2.28
SSU72P53538 YOR029WYOR029W 336 nt0.83□□□□□ -2.28
SSU72P53538 YBR221W-AYBR221W-A 105 nt0.83□□□□□ -2.28
SSU72P53538 STO1YMR125W 2586 nt0.83□□□□□ -2.28
SSU72P53538 PDE2YOR360C 1581 nt0.83□□□□□ -2.28
SSU72P53538 CUL3YGR003W 2235 nt0.83□□□□□ -2.28
SSU72P53538 SLD3YGL113W 2007 nt0.82□□□□□ -2.28
SSU72P53538 GPG1YGL121C 381 nt0.82□□□□□ -2.28
SSU72P53538 YHL046W-AYHL046W-A 327 nt0.82□□□□□ -2.28
SSU72P53538 DOP1YDR141C 5097 nt0.81□□□□□ -2.28
SSU72P53538 HTB2YBL002W 396 nt0.81□□□□□ -2.28
SSU72P53538 YBL008W-AYBL008W-A 240 nt0.81□□□□□ -2.28
SSU72P53538 YPR016W-AYPR016W-A 261 nt0.81□□□□□ -2.28
SSU72P53538 YBR200W-AYBR200W-A 165 nt0.81□□□□□ -2.28
SSU72P53538 BUD3YCL014W 4911 nt0.8□□□□□ -2.28
SSU72P53538 YDL206WYDL206W 2289 nt0.8□□□□□ -2.28
SSU72P53538 YJR011CYJR011C 786 nt0.8□□□□□ -2.28
SSU72P53538 PAN2YGL094C 3348 nt0.79□□□□□ -2.28
SSU72P53538 PTP2YOR208W 2253 nt0.79□□□□□ -2.28
SSU72P53538 RPL35AYDL191W 363 nt0.79□□□□□ -2.28
SSU72P53538 YLL007CYLL007C 1998 nt0.78□□□□□ -2.28
SSU72P53538 YHR007C-AYHR007C-A 216 nt0.78□□□□□ -2.28
SSU72P53538 YPR197CYPR197C 564 nt0.78□□□□□ -2.28
SSU72P53538 YAR009CYAR009C 3591 nt0.78□□□□□ -2.28
SSU72P53538 TTI1YKL033W 3117 nt0.78□□□□□ -2.29
SSU72P53538 HMRA1YCR097W 381 nt0.77□□□□□ -2.29
SSU72P53538 YAR029WYAR029W 225 nt0.77□□□□□ -2.29
SSU72P53538 WAR1YML076C 2835 nt0.76□□□□□ -2.29
SSU72P53538 YCK3YER123W 1575 nt0.76□□□□□ -2.29
SSU72P53538 YPR117WYPR117W 7470 nt0.76□□□□□ -2.29
SSU72P53538 NUP157YER105C 4176 nt0.75□□□□□ -2.29
SSU72P53538 OST1YJL002C 1431 nt0.75□□□□□ -2.29
SSU72P53538 snR56snR56 88 nt0.75□□□□□ -2.29
SSU72P53538 YDR521WYDR521W 336 nt0.75□□□□□ -2.29
SSU72P53538 GIM4YEL003W 336 nt0.75□□□□□ -2.29
SSU72P53538 HMRA2YCR096C 360 nt0.74□□□□□ -2.29
SSU72P53538 YDR048CYDR048C 315 nt0.74□□□□□ -2.29
SSU72P53538 YHR175W-AYHR175W-A 150 nt0.74□□□□□ -2.29
SSU72P53538 TAR1YLR154W-C 375 nt0.74□□□□□ -2.29
SSU72P53538 UBP3YER151C 2739 nt0.73□□□□□ -2.29
SSU72P53538 YHL042WYHL042W 453 nt0.73□□□□□ -2.29
SSU72P53538 YPL038W-AYPL038W-A 192 nt0.73□□□□□ -2.29
SSU72P53538 YBR206WYBR206W 324 nt0.73□□□□□ -2.29
SSU72P53538 YDL073WYDL073W 2955 nt0.72□□□□□ -2.29
SSU72P53538 PAU24YBR301W 363 nt0.72□□□□□ -2.29
SSU72P53538 YDR102CYDR102C 333 nt0.71□□□□□ -2.3
SSU72P53538 YAF9YNL107W 681 nt0.71□□□□□ -2.3
SSU72P53538 YDL240C-AYDL240C-A 138 nt0.7□□□□□ -2.3
SSU72P53538 YBR064WYBR064W 429 nt0.7□□□□□ -2.3
SSU72P53538 PRP16YKR086W 3216 nt0.7□□□□□ -2.3
SSU72P53538 GEA2YEL022W 4380 nt0.69□□□□□ -2.3
SSU72P53538 tR(ACG)Q2tR(ACG)Q2 74 nt0.69□□□□□ -2.3
SSU72P53538 SSS1YDR086C 243 nt0.68□□□□□ -2.3
SSU72P53538 ISD11YER048W-A 285 nt0.68□□□□□ -2.3
SSU72P53538 RPS25BYLR333C 327 nt0.68□□□□□ -2.3
SSU72P53538 YOR011W-AYOR011W-A 207 nt0.68□□□□□ -2.3
SSU72P53538 YJL120WYJL120W 324 nt0.67□□□□□ -2.3
SSU72P53538 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
SSU72P53538 YDL196WYDL196W 330 nt0.66□□□□□ -2.3
SSU72P53538 YDR183C-AYDR183C-A 258 nt0.66□□□□□ -2.3
SSU72P53538 OLI1Q0130 231 nt0.66□□□□□ -2.3
SSU72P53538 ECM12YHR021W-A 456 nt0.66□□□□□ -2.3
SSU72P53538 YMR321CYMR321C 318 nt0.66□□□□□ -2.3
SSU72P53538 DBP6YNR038W 1890 nt0.65□□□□□ -2.3
SSU72P53538 YIL115W-AYIL115W-A 372 nt0.65□□□□□ -2.31
SSU72P53538 YMR031W-AYMR031W-A 327 nt0.65□□□□□ -2.31
SSU72P53538 YOR282WYOR282W 321 nt0.65□□□□□ -2.31
SSU72P53538 YPL225WYPL225W 441 nt0.65□□□□□ -2.31
SSU72P53538 snR36snR36 182 nt0.65□□□□□ -2.31
SSU72P53538 SPO21YOL091W 1830 nt0.64□□□□□ -2.31
SSU72P53538 HTL1YCR020W-B 237 nt0.64□□□□□ -2.31
SSU72P53538 ATP6Q0085 780 nt0.64□□□□□ -2.31
SSU72P53538 ALG13YGL047W 609 nt0.64□□□□□ -2.31
SSU72P53538 IES4YOR189W 351 nt0.64□□□□□ -2.31
SSU72P53538 YPR159C-AYPR159C-A 102 nt0.64□□□□□ -2.31
SSU72P53538 MCM10YIL150C 1716 nt0.64□□□□□ -2.31
SSU72P53538 YDR344CYDR344C 444 nt0.63□□□□□ -2.31
SSU72P53538 PAM16YJL104W 450 nt0.63□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms