Protein–RNA interactions for Protein: P53236

RSC1, Chromatin structure-remodeling complex subunit RSC1, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC1P53236 YNL324WYNL324W 396 nt1.01□□□□□ -2.25
RSC1P53236 YLR202CYLR202C 327 nt0.99□□□□□ -2.25
RSC1P53236 YML007C-AYML007C-A 111 nt0.99□□□□□ -2.25
RSC1P53236 YOR282WYOR282W 321 nt0.98□□□□□ -2.25
RSC1P53236 PAC1YOR269W 1485 nt0.98□□□□□ -2.25
RSC1P53236 NIP100YPL174C 2607 nt0.98□□□□□ -2.25
RSC1P53236 LTE1YAL024C 4308 nt0.97□□□□□ -2.25
RSC1P53236 SMC1YFL008W 3678 nt0.97□□□□□ -2.25
RSC1P53236 YOR029WYOR029W 336 nt0.97□□□□□ -2.25
RSC1P53236 YLL007CYLL007C 1998 nt0.96□□□□□ -2.26
RSC1P53236 YDL196WYDL196W 330 nt0.96□□□□□ -2.26
RSC1P53236 ALG13YGL047W 609 nt0.96□□□□□ -2.26
RSC1P53236 YPR002C-AYPR002C-A 198 nt0.96□□□□□ -2.26
RSC1P53236 DBP6YNR038W 1890 nt0.96□□□□□ -2.26
RSC1P53236 MAM33YIL070C 801 nt0.95□□□□□ -2.26
RSC1P53236 YGR042WYGR042W 816 nt0.94□□□□□ -2.26
RSC1P53236 PAM16YJL104W 450 nt0.94□□□□□ -2.26
RSC1P53236 YIL142C-AYIL142C-A 333 nt0.93□□□□□ -2.26
RSC1P53236 YJR157WYJR157W 363 nt0.93□□□□□ -2.26
RSC1P53236 VPS20YMR077C 666 nt0.93□□□□□ -2.26
RSC1P53236 RPS30BYOR182C 192 nt0.93□□□□□ -2.26
RSC1P53236 IES4YOR189W 351 nt0.93□□□□□ -2.26
RSC1P53236 PCC1YKR095W-A 267 nt0.92□□□□□ -2.26
RSC1P53236 PRM3YPL192C 402 nt0.92□□□□□ -2.26
RSC1P53236 YDL073WYDL073W 2955 nt0.91□□□□□ -2.26
RSC1P53236 PRP16YKR086W 3216 nt0.9□□□□□ -2.27
RSC1P53236 UTP20YBL004W 7482 nt0.9□□□□□ -2.27
RSC1P53236 YLR434CYLR434C 384 nt0.9□□□□□ -2.27
RSC1P53236 YOR032W-AYOR032W-A 201 nt0.9□□□□□ -2.27
RSC1P53236 SEC1YDR164C 2175 nt0.89□□□□□ -2.27
RSC1P53236 YDR521WYDR521W 336 nt0.88□□□□□ -2.27
RSC1P53236 INA22YIR024C 651 nt0.87□□□□□ -2.27
RSC1P53236 YJR011CYJR011C 786 nt0.87□□□□□ -2.27
RSC1P53236 YLR264C-AYLR264C-A 117 nt0.87□□□□□ -2.27
RSC1P53236 NHP2YDL208W 471 nt0.86□□□□□ -2.27
RSC1P53236 YDR426CYDR426C 378 nt0.86□□□□□ -2.27
RSC1P53236 AGA2YGL032C 264 nt0.86□□□□□ -2.27
RSC1P53236 YOR072W-AYOR072W-A 249 nt0.86□□□□□ -2.27
RSC1P53236 HMRA2YCR096C 360 nt0.85□□□□□ -2.27
RSC1P53236 SWF1YDR126W 1011 nt0.85□□□□□ -2.27
RSC1P53236 YHR063W-AYHR063W-A 336 nt0.85□□□□□ -2.27
RSC1P53236 PMP1YCR024C-A 123 nt0.84□□□□□ -2.27
RSC1P53236 YBL008W-AYBL008W-A 240 nt0.84□□□□□ -2.27
RSC1P53236 BSC3YLR465C 309 nt0.84□□□□□ -2.27
RSC1P53236 YMR001C-AYMR001C-A 231 nt0.84□□□□□ -2.27
RSC1P53236 YPL044CYPL044C 549 nt0.84□□□□□ -2.27
RSC1P53236 YOR053WYOR053W 342 nt0.83□□□□□ -2.28
RSC1P53236 YPR159C-AYPR159C-A 102 nt0.83□□□□□ -2.28
RSC1P53236 OST1YJL002C 1431 nt0.82□□□□□ -2.28
RSC1P53236 PAA1YDR071C 576 nt0.82□□□□□ -2.28
RSC1P53236 YBR285WYBR285W 435 nt0.82□□□□□ -2.28
RSC1P53236 NOP9YJL010C 2001 nt0.82□□□□□ -2.28
RSC1P53236 SPO21YOL091W 1830 nt0.81□□□□□ -2.28
RSC1P53236 YCK3YER123W 1575 nt0.79□□□□□ -2.28
RSC1P53236 OLI1Q0130 231 nt0.79□□□□□ -2.28
RSC1P53236 CMC4YMR194C-B 222 nt0.79□□□□□ -2.28
RSC1P53236 YBR206WYBR206W 324 nt0.79□□□□□ -2.28
RSC1P53236 GEA2YEL022W 4380 nt0.79□□□□□ -2.28
RSC1P53236 YMR160WYMR160W 2451 nt0.79□□□□□ -2.28
RSC1P53236 YOR121CYOR121C 306 nt0.78□□□□□ -2.28
RSC1P53236 YBR064WYBR064W 429 nt0.78□□□□□ -2.28
RSC1P53236 YER079WYER079W 633 nt0.77□□□□□ -2.29
RSC1P53236 VAR1Q0140 1197 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)BtT(AGU)B 73 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)CtT(AGU)C 73 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)DtT(AGU)D 73 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)HtT(AGU)H 73 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)I1tT(AGU)I1 73 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)I2tT(AGU)I2 73 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)JtT(AGU)J 73 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)N1tT(AGU)N1 73 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)N2tT(AGU)N2 73 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)O1tT(AGU)O1 73 nt0.77□□□□□ -2.29
RSC1P53236 tT(AGU)O2tT(AGU)O2 73 nt0.77□□□□□ -2.29
RSC1P53236 BFR2YDR299W 1605 nt0.77□□□□□ -2.29
RSC1P53236 ECM12YHR021W-A 456 nt0.76□□□□□ -2.29
RSC1P53236 YLR222C-AYLR222C-A 231 nt0.76□□□□□ -2.29
RSC1P53236 YOR293C-AYOR293C-A 150 nt0.76□□□□□ -2.29
RSC1P53236 YER137W-AYER137W-A 306 nt0.74□□□□□ -2.29
RSC1P53236 RPL26BYGR034W 384 nt0.74□□□□□ -2.29
RSC1P53236 YOR218CYOR218C 420 nt0.74□□□□□ -2.29
RSC1P53236 LEE1YPL054W 906 nt0.74□□□□□ -2.29
RSC1P53236 NPR2YEL062W 1848 nt0.73□□□□□ -2.29
RSC1P53236 YHR138CYHR138C 345 nt0.73□□□□□ -2.29
RSC1P53236 YMR031W-AYMR031W-A 327 nt0.73□□□□□ -2.29
RSC1P53236 BEM3YPL115C 3387 nt0.73□□□□□ -2.29
RSC1P53236 MYO1YHR023W 5787 nt0.73□□□□□ -2.29
RSC1P53236 YDR344CYDR344C 444 nt0.72□□□□□ -2.29
RSC1P53236 tF(GAA)BtF(GAA)B 73 nt0.72□□□□□ -2.29
RSC1P53236 tF(GAA)FtF(GAA)F 73 nt0.72□□□□□ -2.29
RSC1P53236 tF(GAA)GtF(GAA)G 73 nt0.72□□□□□ -2.29
RSC1P53236 tF(GAA)H1tF(GAA)H1 73 nt0.72□□□□□ -2.29
RSC1P53236 tF(GAA)H2tF(GAA)H2 73 nt0.72□□□□□ -2.29
RSC1P53236 tF(GAA)MtF(GAA)M 73 nt0.72□□□□□ -2.29
RSC1P53236 tF(GAA)P1tF(GAA)P1 73 nt0.72□□□□□ -2.29
RSC1P53236 tF(GAA)P2tF(GAA)P2 73 nt0.72□□□□□ -2.29
RSC1P53236 IQG1YPL242C 4488 nt0.72□□□□□ -2.29
RSC1P53236 RKR1YMR247C 4689 nt0.71□□□□□ -2.3
RSC1P53236 YAL063C-AYAL063C-A 291 nt0.71□□□□□ -2.3
RSC1P53236 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms