Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 SLX4YLR135W 2247 nt1.58□□□□□ -2.16
VPS4P52917 SSS1YDR086C 243 nt1.58□□□□□ -2.16
VPS4P52917 YLR140WYLR140W 327 nt1.58□□□□□ -2.16
VPS4P52917 RPS30BYOR182C 192 nt1.58□□□□□ -2.16
VPS4P52917 YOR231C-AYOR231C-A 201 nt1.58□□□□□ -2.16
VPS4P52917 NCA2YPR155C 1851 nt1.58□□□□□ -2.16
VPS4P52917 NUT1YGL151W 3399 nt1.58□□□□□ -2.16
VPS4P52917 SEC21YNL287W 2808 nt1.57□□□□□ -2.16
VPS4P52917 SPT21YMR179W 2277 nt1.57□□□□□ -2.16
VPS4P52917 VPS54YDR027C 2670 nt1.57□□□□□ -2.16
VPS4P52917 SLI15YBR156C 2097 nt1.57□□□□□ -2.16
VPS4P52917 PBY1YBR094W 2262 nt1.56□□□□□ -2.16
VPS4P52917 snR60snR60 104 nt1.56□□□□□ -2.16
VPS4P52917 YDR344CYDR344C 444 nt1.56□□□□□ -2.16
VPS4P52917 YER181CYER181C 324 nt1.56□□□□□ -2.16
VPS4P52917 RPL34BYIL052C 366 nt1.56□□□□□ -2.16
VPS4P52917 YPR010C-AYPR010C-A 219 nt1.56□□□□□ -2.16
VPS4P52917 KAP122YGL016W 3246 nt1.56□□□□□ -2.16
VPS4P52917 BST1YFL025C 3090 nt1.55□□□□□ -2.16
VPS4P52917 COG4YPR105C 2586 nt1.55□□□□□ -2.16
VPS4P52917 YCK3YER123W 1575 nt1.55□□□□□ -2.16
VPS4P52917 YIL115W-AYIL115W-A 372 nt1.55□□□□□ -2.16
VPS4P52917 YIR044CYIR044C 186 nt1.55□□□□□ -2.16
VPS4P52917 VPS55YJR044C 423 nt1.55□□□□□ -2.16
VPS4P52917 YBL008W-AYBL008W-A 240 nt1.55□□□□□ -2.16
VPS4P52917 CDC25YLR310C 4770 nt1.54□□□□□ -2.16
VPS4P52917 YHL042WYHL042W 453 nt1.54□□□□□ -2.16
VPS4P52917 YML099W-AYML099W-A 330 nt1.54□□□□□ -2.16
VPS4P52917 CUL3YGR003W 2235 nt1.54□□□□□ -2.16
VPS4P52917 LCD1YDR499W 2244 nt1.53□□□□□ -2.16
VPS4P52917 ALG13YGL047W 609 nt1.53□□□□□ -2.16
VPS4P52917 IML1YJR138W 4755 nt1.53□□□□□ -2.16
VPS4P52917 snR14snR14 160 nt1.53□□□□□ -2.16
VPS4P52917 MDS3YGL197W 4464 nt1.53□□□□□ -2.16
VPS4P52917 YLL054CYLL054C 2532 nt1.52□□□□□ -2.17
VPS4P52917 YJL015CYJL015C 285 nt1.52□□□□□ -2.17
VPS4P52917 PKH2YOL100W 3246 nt1.51□□□□□ -2.17
VPS4P52917 CDC36YDL165W 576 nt1.51□□□□□ -2.17
VPS4P52917 QCR9YGR183C 201 nt1.51□□□□□ -2.17
VPS4P52917 INA22YIR024C 651 nt1.5□□□□□ -2.17
VPS4P52917 YGR109W-BYGR109W-B 4644 nt1.5□□□□□ -2.17
VPS4P52917 YLL007CYLL007C 1998 nt1.5□□□□□ -2.17
VPS4P52917 COG8YML071C 1824 nt1.5□□□□□ -2.17
VPS4P52917 VIK1YPL253C 1944 nt1.49□□□□□ -2.17
VPS4P52917 YGR069WYGR069W 336 nt1.49□□□□□ -2.17
VPS4P52917 YIL020C-AYIL020C-A 339 nt1.49□□□□□ -2.17
VPS4P52917 PTP2YOR208W 2253 nt1.49□□□□□ -2.17
VPS4P52917 RAD61YDR014W 1944 nt1.48□□□□□ -2.17
VPS4P52917 HMRA2YCR096C 360 nt1.48□□□□□ -2.17
VPS4P52917 SPO75YLL005C 2607 nt1.48□□□□□ -2.17
VPS4P52917 RSM22YKL155C 1887 nt1.48□□□□□ -2.17
VPS4P52917 AIM44YPL158C 2277 nt1.47□□□□□ -2.17
VPS4P52917 IFH1YLR223C 3258 nt1.47□□□□□ -2.17
VPS4P52917 TRM732YMR259C 4263 nt1.46□□□□□ -2.18
VPS4P52917 GPG1YGL121C 381 nt1.46□□□□□ -2.18
VPS4P52917 RPS25BYLR333C 327 nt1.46□□□□□ -2.18
VPS4P52917 EST2YLR318W 2655 nt1.46□□□□□ -2.18
VPS4P52917 ALY2YJL084C 3141 nt1.46□□□□□ -2.18
VPS4P52917 NST1YNL091W 3723 nt1.45□□□□□ -2.18
VPS4P52917 tV(UAC)BtV(UAC)B 74 nt1.45□□□□□ -2.18
VPS4P52917 tV(UAC)DtV(UAC)D 74 nt1.45□□□□□ -2.18
VPS4P52917 YNL028WYNL028W 318 nt1.45□□□□□ -2.18
VPS4P52917 CSE2YNR010W 450 nt1.45□□□□□ -2.18
VPS4P52917 AZF1YOR113W 2745 nt1.45□□□□□ -2.18
VPS4P52917 MMS4YBR098W 2076 nt1.44□□□□□ -2.18
VPS4P52917 RAD9YDR217C 3930 nt1.44□□□□□ -2.18
VPS4P52917 YDL206WYDL206W 2289 nt1.44□□□□□ -2.18
VPS4P52917 YDR521WYDR521W 336 nt1.44□□□□□ -2.18
VPS4P52917 YJL120WYJL120W 324 nt1.44□□□□□ -2.18
VPS4P52917 YMR321CYMR321C 318 nt1.44□□□□□ -2.18
VPS4P52917 YOR161W-BYOR161W-B 261 nt1.44□□□□□ -2.18
VPS4P52917 SPO21YOL091W 1830 nt1.44□□□□□ -2.18
VPS4P52917 FIG4YNL325C 2640 nt1.44□□□□□ -2.18
VPS4P52917 NUP188YML103C 4968 nt1.44□□□□□ -2.18
VPS4P52917 DOP1YDR141C 5097 nt1.43□□□□□ -2.18
VPS4P52917 ROM2YLR371W 4071 nt1.43□□□□□ -2.18
VPS4P52917 SLD3YGL113W 2007 nt1.43□□□□□ -2.18
VPS4P52917 YCS4YLR272C 3531 nt1.43□□□□□ -2.18
VPS4P52917 RPS27BYHR021C 249 nt1.42□□□□□ -2.18
VPS4P52917 YOR008C-AYOR008C-A 225 nt1.42□□□□□ -2.18
VPS4P52917 YOR218CYOR218C 420 nt1.42□□□□□ -2.18
VPS4P52917 YBR206WYBR206W 324 nt1.42□□□□□ -2.18
VPS4P52917 SWI4YER111C 3282 nt1.42□□□□□ -2.18
VPS4P52917 SIP4YJL089W 2490 nt1.41□□□□□ -2.18
VPS4P52917 SET3YKR029C 2256 nt1.4□□□□□ -2.19
VPS4P52917 YCR022CYCR022C 345 nt1.4□□□□□ -2.19
VPS4P52917 SCC2YDR180W 4482 nt1.4□□□□□ -2.19
VPS4P52917 tF(GAA)BtF(GAA)B 73 nt1.39□□□□□ -2.19
VPS4P52917 tF(GAA)FtF(GAA)F 73 nt1.39□□□□□ -2.19
VPS4P52917 tF(GAA)GtF(GAA)G 73 nt1.39□□□□□ -2.19
VPS4P52917 tF(GAA)H1tF(GAA)H1 73 nt1.39□□□□□ -2.19
VPS4P52917 tF(GAA)H2tF(GAA)H2 73 nt1.39□□□□□ -2.19
VPS4P52917 tF(GAA)MtF(GAA)M 73 nt1.39□□□□□ -2.19
VPS4P52917 tF(GAA)P1tF(GAA)P1 73 nt1.39□□□□□ -2.19
VPS4P52917 tF(GAA)P2tF(GAA)P2 73 nt1.39□□□□□ -2.19
VPS4P52917 YEL020C-BYEL020C-B 198 nt1.39□□□□□ -2.19
VPS4P52917 YOR282WYOR282W 321 nt1.39□□□□□ -2.19
VPS4P52917 YPL152W-AYPL152W-A 99 nt1.39□□□□□ -2.19
VPS4P52917 YBR221W-AYBR221W-A 105 nt1.39□□□□□ -2.19
VPS4P52917 STO1YMR125W 2586 nt1.39□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 48.6 ms