Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
GTF2A1P52655 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.67■□□□□ 0.74
GTF2A1P52655 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.67■□□□□ 0.74
GTF2A1P52655 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
GTF2A1P52655 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GTF2A1P52655 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GTF2A1P52655 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.66■□□□□ 0.74
GTF2A1P52655 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
GTF2A1P52655 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.66■□□□□ 0.74
GTF2A1P52655 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.66■□□□□ 0.74
GTF2A1P52655 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.66■□□□□ 0.74
GTF2A1P52655 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.66■□□□□ 0.74
GTF2A1P52655 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
GTF2A1P52655 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GTF2A1P52655 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.66■□□□□ 0.74
GTF2A1P52655 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
GTF2A1P52655 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GTF2A1P52655 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GTF2A1P52655 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1P52655 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1P52655 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1P52655 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
GTF2A1P52655 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.65■□□□□ 0.74
GTF2A1P52655 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1P52655 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.65■□□□□ 0.74
GTF2A1P52655 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.65■□□□□ 0.74
GTF2A1P52655 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
GTF2A1P52655 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1P52655 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.65■□□□□ 0.74
GTF2A1P52655 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.65■□□□□ 0.74
GTF2A1P52655 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.65■□□□□ 0.74
GTF2A1P52655 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
GTF2A1P52655 AF131216.4-201ENST00000638924 1588 ntBASIC19.65■□□□□ 0.74
GTF2A1P52655 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1P52655 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
GTF2A1P52655 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1P52655 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1P52655 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.65■□□□□ 0.74
GTF2A1P52655 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GTF2A1P52655 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
GTF2A1P52655 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.65■□□□□ 0.74
GTF2A1P52655 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
GTF2A1P52655 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
GTF2A1P52655 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GTF2A1P52655 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GTF2A1P52655 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GTF2A1P52655 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GTF2A1P52655 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
GTF2A1P52655 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
GTF2A1P52655 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2A1P52655 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
GTF2A1P52655 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF2A1P52655 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF2A1P52655 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
GTF2A1P52655 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2A1P52655 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2A1P52655 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
GTF2A1P52655 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.64■□□□□ 0.73
GTF2A1P52655 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2A1P52655 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2A1P52655 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
GTF2A1P52655 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
GTF2A1P52655 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1P52655 AC009113.1-201ENST00000570267 2443 ntBASIC19.63■□□□□ 0.73
GTF2A1P52655 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
GTF2A1P52655 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
GTF2A1P52655 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1P52655 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1P52655 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1P52655 TCF3P1-201ENST00000423021 1937 ntBASIC19.63■□□□□ 0.73
GTF2A1P52655 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GTF2A1P52655 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1P52655 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GTF2A1P52655 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1P52655 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.63■□□□□ 0.73
GTF2A1P52655 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2A1P52655 AC022616.5-201ENST00000518796 181 ntBASIC19.63■□□□□ 0.73
GTF2A1P52655 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms