Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.68■□□□□ 0.9
NEK3P51956 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK3P51956 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK3P51956 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.67■□□□□ 0.9
NEK3P51956 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.67■□□□□ 0.9
NEK3P51956 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.67■□□□□ 0.9
NEK3P51956 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 KRT18P68-201ENST00000392293 1000 ntBASIC20.67■□□□□ 0.9
NEK3P51956 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.67■□□□□ 0.9
NEK3P51956 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.67■□□□□ 0.9
NEK3P51956 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.67■□□□□ 0.9
NEK3P51956 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NEK3P51956 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.67■□□□□ 0.9
NEK3P51956 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK3P51956 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.67■□□□□ 0.9
NEK3P51956 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.67■□□□□ 0.9
NEK3P51956 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NEK3P51956 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK3P51956 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK3P51956 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NEK3P51956 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NEK3P51956 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.66■□□□□ 0.9
NEK3P51956 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NEK3P51956 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK3P51956 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEK3P51956 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.66■□□□□ 0.9
NEK3P51956 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEK3P51956 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NEK3P51956 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK3P51956 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.66■□□□□ 0.9
NEK3P51956 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK3P51956 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.65■□□□□ 0.9
NEK3P51956 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK3P51956 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK3P51956 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK3P51956 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
NEK3P51956 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK3P51956 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK3P51956 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK3P51956 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.65■□□□□ 0.9
NEK3P51956 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.65■□□□□ 0.9
NEK3P51956 TSPY20P-201ENST00000450910 630 ntBASIC20.65■□□□□ 0.9
NEK3P51956 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.65■□□□□ 0.9
NEK3P51956 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEK3P51956 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.65■□□□□ 0.9
NEK3P51956 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK3P51956 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.65■□□□□ 0.9
NEK3P51956 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK3P51956 AC112907.3-201ENST00000577781 2400 ntBASIC20.65■□□□□ 0.9
NEK3P51956 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
NEK3P51956 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK3P51956 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NEK3P51956 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.64■□□□□ 0.9
NEK3P51956 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NEK3P51956 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.64■□□□□ 0.9
NEK3P51956 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
NEK3P51956 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.64■□□□□ 0.9
NEK3P51956 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.64■□□□□ 0.9
NEK3P51956 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEK3P51956 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEK3P51956 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.64■□□□□ 0.89
NEK3P51956 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEK3P51956 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NEK3P51956 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.64■□□□□ 0.89
NEK3P51956 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.64■□□□□ 0.89
NEK3P51956 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.64■□□□□ 0.89
NEK3P51956 MIR4651-201ENST00000582622 73 ntBASIC20.64■□□□□ 0.89
NEK3P51956 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEK3P51956 FP700111.2-201ENST00000619190 1892 ntBASIC20.64■□□□□ 0.89
NEK3P51956 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
NEK3P51956 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.64■□□□□ 0.89
NEK3P51956 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEK3P51956 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEK3P51956 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK3P51956 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK3P51956 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.63■□□□□ 0.89
NEK3P51956 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.63■□□□□ 0.89
NEK3P51956 AC099778.1-201ENST00000568593 1911 ntBASIC20.63■□□□□ 0.89
NEK3P51956 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK3P51956 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.63■□□□□ 0.89
NEK3P51956 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NEK3P51956 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK3P51956 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
NEK3P51956 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK3P51956 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK3P51956 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms