Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPAP49450 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPAP49450 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 UBE2DNL-204ENST00000602536 740 ntBASIC18.14■□□□□ 0.49
CENPAP49450 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CENPAP49450 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CENPAP49450 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 RBM17P2-201ENST00000616397 1405 ntBASIC18.14■□□□□ 0.49
CENPAP49450 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CENPAP49450 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPAP49450 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.13■□□□□ 0.49
CENPAP49450 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPAP49450 PKD1P1-201ENST00000458669 6805 ntBASIC18.13■□□□□ 0.49
CENPAP49450 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPAP49450 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CENPAP49450 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
CENPAP49450 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPAP49450 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.13■□□□□ 0.49
CENPAP49450 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.13■□□□□ 0.49
CENPAP49450 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CENPAP49450 NTF6G-201ENST00000591094 616 ntBASIC18.13■□□□□ 0.49
CENPAP49450 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.13■□□□□ 0.49
CENPAP49450 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPAP49450 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CENPAP49450 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CENPAP49450 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPAP49450 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPAP49450 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CENPAP49450 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CENPAP49450 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CENPAP49450 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CENPAP49450 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPAP49450 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPAP49450 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPAP49450 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.12■□□□□ 0.49
CENPAP49450 AC091799.1-201ENST00000422823 811 ntBASIC18.12■□□□□ 0.49
CENPAP49450 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CENPAP49450 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.12■□□□□ 0.49
CENPAP49450 AC019069.1-201ENST00000610008 1333 ntBASIC18.12■□□□□ 0.49
CENPAP49450 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.12■□□□□ 0.49
CENPAP49450 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPAP49450 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPAP49450 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPAP49450 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CENPAP49450 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CENPAP49450 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CENPAP49450 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CENPAP49450 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CENPAP49450 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CENPAP49450 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.11■□□□□ 0.49
CENPAP49450 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.11■□□□□ 0.49
CENPAP49450 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.11■□□□□ 0.49
CENPAP49450 CDV3P1-201ENST00000471403 739 ntBASIC18.11■□□□□ 0.49
CENPAP49450 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.11■□□□□ 0.49
CENPAP49450 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.11■□□□□ 0.49
CENPAP49450 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.11■□□□□ 0.49
CENPAP49450 FAM21FP-204ENST00000608637 956 ntBASIC18.11■□□□□ 0.49
CENPAP49450 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.11■□□□□ 0.49
CENPAP49450 HTR7P1-202ENST00000624664 4411 ntBASIC18.11■□□□□ 0.49
CENPAP49450 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.11■□□□□ 0.49
CENPAP49450 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CENPAP49450 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.11■□□□□ 0.49
CENPAP49450 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CENPAP49450 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.11■□□□□ 0.49
CENPAP49450 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.11■□□□□ 0.49
CENPAP49450 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CENPAP49450 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CENPAP49450 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CENPAP49450 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CENPAP49450 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPAP49450 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CENPAP49450 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.1■□□□□ 0.49
CENPAP49450 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.1■□□□□ 0.49
CENPAP49450 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CENPAP49450 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms