Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RXRGP48443 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
RXRGP48443 Z98882.1-201ENST00000622160 2253 ntBASIC20.05■□□□□ 0.8
RXRGP48443 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 AC007952.6-201ENST00000573168 2673 ntBASIC20.05■□□□□ 0.8
RXRGP48443 AC003957.1-201ENST00000625108 2673 ntBASIC20.05■□□□□ 0.8
RXRGP48443 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RXRGP48443 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RXRGP48443 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.05■□□□□ 0.8
RXRGP48443 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.05■□□□□ 0.8
RXRGP48443 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RXRGP48443 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.05■□□□□ 0.8
RXRGP48443 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.05■□□□□ 0.8
RXRGP48443 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.05■□□□□ 0.8
RXRGP48443 MTDHP1-201ENST00000605323 784 ntBASIC20.05■□□□□ 0.8
RXRGP48443 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RXRGP48443 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RXRGP48443 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.05■□□□□ 0.8
RXRGP48443 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RXRGP48443 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RXRGP48443 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.05■□□□□ 0.8
RXRGP48443 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRGP48443 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRGP48443 AC005229.4-201ENST00000610085 2198 ntBASIC20.04■□□□□ 0.8
RXRGP48443 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RXRGP48443 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRGP48443 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRGP48443 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRGP48443 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RXRGP48443 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RXRGP48443 AC133681.1-201ENST00000465482 601 ntBASIC20.04■□□□□ 0.8
RXRGP48443 AC005829.2-201ENST00000571422 1056 ntBASIC20.04■□□□□ 0.8
RXRGP48443 AC120498.8-201ENST00000614275 531 ntBASIC20.04■□□□□ 0.8
RXRGP48443 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.04■□□□□ 0.8
RXRGP48443 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRGP48443 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
RXRGP48443 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRGP48443 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RXRGP48443 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RXRGP48443 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.03■□□□□ 0.8
RXRGP48443 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.03■□□□□ 0.8
RXRGP48443 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RXRGP48443 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.03■□□□□ 0.8
RXRGP48443 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.03■□□□□ 0.8
RXRGP48443 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.03■□□□□ 0.8
RXRGP48443 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.03■□□□□ 0.8
RXRGP48443 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RXRGP48443 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RXRGP48443 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RXRGP48443 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.02■□□□□ 0.8
RXRGP48443 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.02■□□□□ 0.8
RXRGP48443 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.02■□□□□ 0.8
RXRGP48443 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 AC012618.2-201ENST00000428058 849 ntBASIC20.02■□□□□ 0.8
RXRGP48443 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.02■□□□□ 0.8
RXRGP48443 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.02■□□□□ 0.8
RXRGP48443 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 AC073912.3-201ENST00000624414 853 ntBASIC20.02■□□□□ 0.8
RXRGP48443 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RXRGP48443 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RXRGP48443 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRGP48443 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.02■□□□□ 0.79
RXRGP48443 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RXRGP48443 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RXRGP48443 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.02■□□□□ 0.79
RXRGP48443 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RXRGP48443 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RXRGP48443 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.01■□□□□ 0.79
RXRGP48443 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.01■□□□□ 0.79
RXRGP48443 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms