Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.16■□□□□ 0.66
SSR2P43308 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.16■□□□□ 0.66
SSR2P43308 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.16■□□□□ 0.66
SSR2P43308 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.16■□□□□ 0.66
SSR2P43308 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSR2P43308 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.16■□□□□ 0.66
SSR2P43308 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SSR2P43308 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SSR2P43308 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 AL391422.3-201ENST00000603791 2761 ntBASIC19.15■□□□□ 0.66
SSR2P43308 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SSR2P43308 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR2P43308 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.15■□□□□ 0.66
SSR2P43308 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.15■□□□□ 0.66
SSR2P43308 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR2P43308 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.15■□□□□ 0.66
SSR2P43308 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.15■□□□□ 0.66
SSR2P43308 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.15■□□□□ 0.66
SSR2P43308 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.15■□□□□ 0.66
SSR2P43308 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SSR2P43308 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.15■□□□□ 0.66
SSR2P43308 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSR2P43308 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.15■□□□□ 0.66
SSR2P43308 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SSR2P43308 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR2P43308 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SSR2P43308 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSR2P43308 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR2P43308 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR2P43308 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.14■□□□□ 0.66
SSR2P43308 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SSR2P43308 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
SSR2P43308 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSR2P43308 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSR2P43308 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SSR2P43308 GUSBP6-202ENST00000438529 1198 ntBASIC19.14■□□□□ 0.65
SSR2P43308 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SSR2P43308 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.14■□□□□ 0.65
SSR2P43308 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.14■□□□□ 0.65
SSR2P43308 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.14■□□□□ 0.65
SSR2P43308 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.14■□□□□ 0.65
SSR2P43308 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.14■□□□□ 0.65
SSR2P43308 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSR2P43308 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR2P43308 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SSR2P43308 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR2P43308 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SSR2P43308 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SSR2P43308 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
SSR2P43308 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.13■□□□□ 0.65
SSR2P43308 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR2P43308 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR2P43308 AL109923.1-201ENST00000618799 583 ntBASIC19.13■□□□□ 0.65
SSR2P43308 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR2P43308 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.13■□□□□ 0.65
SSR2P43308 AC099778.1-201ENST00000568593 1911 ntBASIC19.13■□□□□ 0.65
SSR2P43308 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SSR2P43308 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SSR2P43308 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SSR2P43308 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.13■□□□□ 0.65
SSR2P43308 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR2P43308 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SSR2P43308 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.12■□□□□ 0.65
SSR2P43308 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.12■□□□□ 0.65
SSR2P43308 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.12■□□□□ 0.65
SSR2P43308 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SSR2P43308 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.12■□□□□ 0.65
SSR2P43308 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.12■□□□□ 0.65
SSR2P43308 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SSR2P43308 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSR2P43308 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms