Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC026271.2-201ENST00000428091 497 ntBASIC21.28■■□□□ 1
SSR1P43307 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SSR1P43307 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSR1P43307 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSR1P43307 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSR1P43307 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSR1P43307 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SSR1P43307 AFG3L1P-217ENST00000557444 2447 ntBASIC21.28■■□□□ 1
SSR1P43307 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSR1P43307 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSR1P43307 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.28■■□□□ 1
SSR1P43307 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSR1P43307 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSR1P43307 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SSR1P43307 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
SSR1P43307 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SSR1P43307 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.27■■□□□ 1
SSR1P43307 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.27■■□□□ 1
SSR1P43307 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.27■■□□□ 1
SSR1P43307 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
SSR1P43307 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.27■■□□□ 1
SSR1P43307 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SSR1P43307 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.27■■□□□ 1
SSR1P43307 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.27■■□□□ 1
SSR1P43307 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.27■■□□□ 1
SSR1P43307 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.27■■□□□ 1
SSR1P43307 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.27■■□□□ 1
SSR1P43307 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SSR1P43307 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SSR1P43307 KRT8P36-201ENST00000489121 1440 ntBASIC21.27■■□□□ 1
SSR1P43307 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SSR1P43307 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SSR1P43307 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SSR1P43307 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.27■□□□□ 0.99
SSR1P43307 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SSR1P43307 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SSR1P43307 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR1P43307 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR1P43307 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.26■□□□□ 0.99
SSR1P43307 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR1P43307 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.26■□□□□ 0.99
SSR1P43307 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.26■□□□□ 0.99
SSR1P43307 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SSR1P43307 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.26■□□□□ 0.99
SSR1P43307 DPP3P2-201ENST00000416030 1696 ntBASIC21.26■□□□□ 0.99
SSR1P43307 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR1P43307 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.26■□□□□ 0.99
SSR1P43307 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSR1P43307 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.26■□□□□ 0.99
SSR1P43307 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.26■□□□□ 0.99
SSR1P43307 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSR1P43307 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR1P43307 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
SSR1P43307 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR1P43307 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR1P43307 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR1P43307 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR1P43307 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR1P43307 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR1P43307 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR1P43307 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.25■□□□□ 0.99
SSR1P43307 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.25■□□□□ 0.99
SSR1P43307 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.25■□□□□ 0.99
SSR1P43307 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.25■□□□□ 0.99
SSR1P43307 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.25■□□□□ 0.99
SSR1P43307 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.25■□□□□ 0.99
SSR1P43307 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.25■□□□□ 0.99
SSR1P43307 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SSR1P43307 AC013268.1-206ENST00000638368 961 ntBASIC21.25■□□□□ 0.99
SSR1P43307 AC112229.1-201ENST00000639295 961 ntBASIC21.25■□□□□ 0.99
SSR1P43307 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SSR1P43307 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SSR1P43307 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR1P43307 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SSR1P43307 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SSR1P43307 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SSR1P43307 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.24■□□□□ 0.99
SSR1P43307 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SSR1P43307 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.24■□□□□ 0.99
SSR1P43307 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.24■□□□□ 0.99
SSR1P43307 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSR1P43307 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.24■□□□□ 0.99
SSR1P43307 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSR1P43307 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
SSR1P43307 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SSR1P43307 MFSD11-216ENST00000590393 1141 ntBASIC21.24■□□□□ 0.99
SSR1P43307 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.24■□□□□ 0.99
SSR1P43307 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.24■□□□□ 0.99
SSR1P43307 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SSR1P43307 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SSR1P43307 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSR1P43307 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
SSR1P43307 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.24■□□□□ 0.99
SSR1P43307 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.24■□□□□ 0.99
SSR1P43307 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.23■□□□□ 0.99
SSR1P43307 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms