Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RPL13AP40429 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPL13AP40429 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL13AP40429 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPL13AP40429 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.85□□□□□ -0.19
RPL13AP40429 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.85□□□□□ -0.19
RPL13AP40429 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.85□□□□□ -0.19
RPL13AP40429 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC13.85□□□□□ -0.19
RPL13AP40429 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC13.85□□□□□ -0.19
RPL13AP40429 KRT16P3-201ENST00000439127 1283 ntBASIC13.85□□□□□ -0.19
RPL13AP40429 AL356441.2-201ENST00000443009 864 ntBASIC13.85□□□□□ -0.19
RPL13AP40429 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.85□□□□□ -0.19
RPL13AP40429 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL13AP40429 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPL13AP40429 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPL13AP40429 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
RPL13AP40429 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
RPL13AP40429 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPL13AP40429 AL365209.1-201ENST00000624418 6473 ntBASIC13.85□□□□□ -0.19
RPL13AP40429 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RPL13AP40429 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
RPL13AP40429 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 AC027702.1-201ENST00000563810 1770 ntBASIC13.84□□□□□ -0.19
RPL13AP40429 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RPL13AP40429 AC004687.1-201ENST00000579003 1625 ntBASIC13.84□□□□□ -0.19
RPL13AP40429 AC004448.1-201ENST00000458332 883 ntBASIC13.84□□□□□ -0.19
RPL13AP40429 LSM7-203ENST00000585409 512 ntTSL 2 BASIC13.84□□□□□ -0.19
RPL13AP40429 AC131212.1-201ENST00000613771 668 ntBASIC13.84□□□□□ -0.19
RPL13AP40429 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.84□□□□□ -0.19
RPL13AP40429 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RPL13AP40429 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 AC116562.4-201ENST00000641316 2276 ntBASIC13.84□□□□□ -0.19
RPL13AP40429 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC13.84□□□□□ -0.19
RPL13AP40429 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.84□□□□□ -0.19
RPL13AP40429 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPL13AP40429 FP325331.1-202ENST00000623531 1380 ntBASIC13.83□□□□□ -0.19
RPL13AP40429 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPL13AP40429 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPL13AP40429 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RPL13AP40429 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.83□□□□□ -0.2
RPL13AP40429 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.83□□□□□ -0.2
RPL13AP40429 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC13.83□□□□□ -0.2
RPL13AP40429 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RPL13AP40429 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RPL13AP40429 MTDHP2-201ENST00000601468 714 ntBASIC13.83□□□□□ -0.2
RPL13AP40429 AC092028.1-203ENST00000608262 953 ntBASIC13.83□□□□□ -0.2
RPL13AP40429 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.83□□□□□ -0.2
RPL13AP40429 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.83□□□□□ -0.2
RPL13AP40429 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPL13AP40429 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RPL13AP40429 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.82□□□□□ -0.2
RPL13AP40429 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RPL13AP40429 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.82□□□□□ -0.2
RPL13AP40429 AC020907.5-201ENST00000624372 1936 ntBASIC13.82□□□□□ -0.2
RPL13AP40429 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 TSPY9P-201ENST00000440215 945 ntBASIC13.82□□□□□ -0.2
RPL13AP40429 TSPY11P-201ENST00000442607 1045 ntBASIC13.82□□□□□ -0.2
RPL13AP40429 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RPL13AP40429 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms