Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 PET127YOR017W 2403 nt1.52□□□□□ -2.17
RPH1P39956 RAD34YDR314C 2079 nt1.52□□□□□ -2.17
RPH1P39956 AI5_ALPHAQ0070 1893 nt1.52□□□□□ -2.17
RPH1P39956 YCR018C-AYCR018C-A 255 nt1.52□□□□□ -2.17
RPH1P39956 PAU3YCR104W 375 nt1.52□□□□□ -2.17
RPH1P39956 YMR230W-AYMR230W-A 189 nt1.52□□□□□ -2.17
RPH1P39956 MAD1YGL086W 2250 nt1.52□□□□□ -2.17
RPH1P39956 PIG1YLR273C 1947 nt1.52□□□□□ -2.17
RPH1P39956 LAA1YJL207C 6045 nt1.52□□□□□ -2.17
RPH1P39956 DGR2YKL121W 2559 nt1.52□□□□□ -2.17
RPH1P39956 YDR406W-AYDR406W-A 246 nt1.51□□□□□ -2.17
RPH1P39956 tF(GAA)QtF(GAA)Q 75 nt1.51□□□□□ -2.17
RPH1P39956 YNL337WYNL337W 255 nt1.51□□□□□ -2.17
RPH1P39956 YOR108C-AYOR108C-A 210 nt1.51□□□□□ -2.17
RPH1P39956 SEY1YOR165W 2331 nt1.51□□□□□ -2.17
RPH1P39956 SPC110YDR356W 2835 nt1.51□□□□□ -2.17
RPH1P39956 YOR019WYOR019W 2193 nt1.51□□□□□ -2.17
RPH1P39956 SPO75YLL005C 2607 nt1.51□□□□□ -2.17
RPH1P39956 tQ(UUG)E2tQ(UUG)E2 72 nt1.5□□□□□ -2.17
RPH1P39956 RPS27BYHR021C 249 nt1.5□□□□□ -2.17
RPH1P39956 APQ12YIL040W 417 nt1.5□□□□□ -2.17
RPH1P39956 YBL008W-AYBL008W-A 240 nt1.5□□□□□ -2.17
RPH1P39956 YOR302WYOR302W 78 nt1.5□□□□□ -2.17
RPH1P39956 YPR092WYPR092W 306 nt1.5□□□□□ -2.17
RPH1P39956 FYV8YGR196C 2454 nt1.5□□□□□ -2.17
RPH1P39956 NOC3YLR002C 1992 nt1.5□□□□□ -2.17
RPH1P39956 SEC63YOR254C 1992 nt1.5□□□□□ -2.17
RPH1P39956 YOR218CYOR218C 420 nt1.49□□□□□ -2.17
RPH1P39956 YLR419WYLR419W 4308 nt1.49□□□□□ -2.17
RPH1P39956 CTF4YPR135W 2784 nt1.49□□□□□ -2.17
RPH1P39956 SPO21YOL091W 1830 nt1.48□□□□□ -2.17
RPH1P39956 snR74snR74 88 nt1.48□□□□□ -2.17
RPH1P39956 RPL31AYDL075W 342 nt1.48□□□□□ -2.17
RPH1P39956 YOR011W-AYOR011W-A 207 nt1.48□□□□□ -2.17
RPH1P39956 SPO24YPR036W-A 204 nt1.48□□□□□ -2.17
RPH1P39956 POL5YEL055C 3069 nt1.48□□□□□ -2.17
RPH1P39956 PAM16YJL104W 450 nt1.47□□□□□ -2.17
RPH1P39956 YJL120WYJL120W 324 nt1.47□□□□□ -2.17
RPH1P39956 RPS25BYLR333C 327 nt1.47□□□□□ -2.17
RPH1P39956 YMR175W-AYMR175W-A 195 nt1.46□□□□□ -2.18
RPH1P39956 KCS1YDR017C 3153 nt1.46□□□□□ -2.18
RPH1P39956 SEC5YDR166C 2916 nt1.45□□□□□ -2.18
RPH1P39956 SSK2YNR031C 4740 nt1.45□□□□□ -2.18
RPH1P39956 RRT15YLR162W-A 189 nt1.44□□□□□ -2.18
RPH1P39956 SGF11YPL047W 300 nt1.44□□□□□ -2.18
RPH1P39956 YLL007CYLL007C 1998 nt1.44□□□□□ -2.18
RPH1P39956 YGR109W-BYGR109W-B 4644 nt1.43□□□□□ -2.18
RPH1P39956 YIR044CYIR044C 186 nt1.43□□□□□ -2.18
RPH1P39956 YNL198CYNL198C 303 nt1.43□□□□□ -2.18
RPH1P39956 YOR225WYOR225W 330 nt1.43□□□□□ -2.18
RPH1P39956 CUL3YGR003W 2235 nt1.43□□□□□ -2.18
RPH1P39956 MCM10YIL150C 1716 nt1.43□□□□□ -2.18
RPH1P39956 MON2YNL297C 4911 nt1.42□□□□□ -2.18
RPH1P39956 VPS55YJR044C 423 nt1.42□□□□□ -2.18
RPH1P39956 YBR182C-AYBR182C-A 195 nt1.42□□□□□ -2.18
RPH1P39956 PIK1YNL267W 3201 nt1.42□□□□□ -2.18
RPH1P39956 HKR1YDR420W 5409 nt1.41□□□□□ -2.18
RPH1P39956 PTP2YOR208W 2253 nt1.41□□□□□ -2.18
RPH1P39956 COG4YPR105C 2586 nt1.41□□□□□ -2.18
RPH1P39956 YKU70YMR284W 1809 nt1.4□□□□□ -2.18
RPH1P39956 SXM1YDR395W 2835 nt1.4□□□□□ -2.18
RPH1P39956 ALK1YGL021W 2283 nt1.4□□□□□ -2.19
RPH1P39956 SLI15YBR156C 2097 nt1.4□□□□□ -2.19
RPH1P39956 YDL185C-AYDL185C-A 228 nt1.4□□□□□ -2.19
RPH1P39956 YIR030W-AYIR030W-A 384 nt1.4□□□□□ -2.19
RPH1P39956 PKH2YOL100W 3246 nt1.4□□□□□ -2.19
RPH1P39956 YLR422WYLR422W 5799 nt1.4□□□□□ -2.19
RPH1P39956 RAD50YNL250W 3939 nt1.39□□□□□ -2.19
RPH1P39956 PIP2YOR363C 2991 nt1.39□□□□□ -2.19
RPH1P39956 YDR521WYDR521W 336 nt1.39□□□□□ -2.19
RPH1P39956 OLI1Q0130 231 nt1.39□□□□□ -2.19
RPH1P39956 CCH1YGR217W 6120 nt1.38□□□□□ -2.19
RPH1P39956 YOR376WYOR376W 369 nt1.38□□□□□ -2.19
RPH1P39956 AHC1YOR023C 1701 nt1.37□□□□□ -2.19
RPH1P39956 PBY1YBR094W 2262 nt1.37□□□□□ -2.19
RPH1P39956 SMC4YLR086W 4257 nt1.37□□□□□ -2.19
RPH1P39956 ISD11YER048W-A 285 nt1.37□□□□□ -2.19
RPH1P39956 YGL007C-AYGL007C-A 87 nt1.37□□□□□ -2.19
RPH1P39956 EMC5YIL027C 426 nt1.37□□□□□ -2.19
RPH1P39956 YOR072W-BYOR072W-B 162 nt1.37□□□□□ -2.19
RPH1P39956 YBR131C-AYBR131C-A 90 nt1.37□□□□□ -2.19
RPH1P39956 YBR206WYBR206W 324 nt1.37□□□□□ -2.19
RPH1P39956 SKI3YPR189W 4299 nt1.37□□□□□ -2.19
RPH1P39956 YGL217CYGL217C 342 nt1.36□□□□□ -2.19
RPH1P39956 ECM12YHR021W-A 456 nt1.36□□□□□ -2.19
RPH1P39956 COF1YLL050C 432 nt1.36□□□□□ -2.19
RPH1P39956 IML1YJR138W 4755 nt1.36□□□□□ -2.19
RPH1P39956 YEL014CYEL014C 306 nt1.35□□□□□ -2.19
RPH1P39956 YLL019W-AYLL019W-A 93 nt1.35□□□□□ -2.19
RPH1P39956 MDS3YGL197W 4464 nt1.35□□□□□ -2.19
RPH1P39956 PMD1YER132C 5262 nt1.35□□□□□ -2.19
RPH1P39956 YGR130CYGR130C 2451 nt1.34□□□□□ -2.19
RPH1P39956 NUT1YGL151W 3399 nt1.34□□□□□ -2.19
RPH1P39956 SLX4YLR135W 2247 nt1.34□□□□□ -2.19
RPH1P39956 YJL022WYJL022W 309 nt1.34□□□□□ -2.19
RPH1P39956 UFD2YDL190C 2886 nt1.34□□□□□ -2.2
RPH1P39956 IFH1YLR223C 3258 nt1.33□□□□□ -2.2
RPH1P39956 Q0032Q0032 291 nt1.33□□□□□ -2.2
RPH1P39956 YJL182CYJL182C 318 nt1.33□□□□□ -2.2
RPH1P39956 YLR140WYLR140W 327 nt1.33□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 29.6 ms