Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.17■□□□□ 0.98
RFC1P35251 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.17■□□□□ 0.98
RFC1P35251 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.16■□□□□ 0.98
RFC1P35251 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.16■□□□□ 0.98
RFC1P35251 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.16■□□□□ 0.98
RFC1P35251 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.16■□□□□ 0.98
RFC1P35251 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFC1P35251 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
RFC1P35251 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC1P35251 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RFC1P35251 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFC1P35251 MKRN4P-201ENST00000444706 1521 ntBASIC21.15■□□□□ 0.98
RFC1P35251 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.15■□□□□ 0.98
RFC1P35251 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RFC1P35251 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.15■□□□□ 0.98
RFC1P35251 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.15■□□□□ 0.98
RFC1P35251 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.15■□□□□ 0.98
RFC1P35251 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.15■□□□□ 0.98
RFC1P35251 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.15■□□□□ 0.98
RFC1P35251 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.15■□□□□ 0.98
RFC1P35251 AL589743.5-201ENST00000616611 1050 ntBASIC21.15■□□□□ 0.98
RFC1P35251 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.15■□□□□ 0.98
RFC1P35251 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFC1P35251 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.15■□□□□ 0.98
RFC1P35251 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC1P35251 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC1P35251 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFC1P35251 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.15■□□□□ 0.98
RFC1P35251 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC1P35251 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFC1P35251 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.14■□□□□ 0.98
RFC1P35251 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFC1P35251 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.14■□□□□ 0.98
RFC1P35251 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.14■□□□□ 0.98
RFC1P35251 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFC1P35251 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFC1P35251 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFC1P35251 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFC1P35251 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFC1P35251 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RFC1P35251 AC006970.2-201ENST00000450065 779 ntBASIC21.14■□□□□ 0.97
RFC1P35251 AC083906.2-201ENST00000511578 360 ntBASIC21.14■□□□□ 0.97
RFC1P35251 PTBP1P-201ENST00000554374 1601 ntBASIC21.14■□□□□ 0.97
RFC1P35251 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RFC1P35251 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RFC1P35251 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
RFC1P35251 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RFC1P35251 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.13■□□□□ 0.97
RFC1P35251 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RFC1P35251 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RFC1P35251 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.13■□□□□ 0.97
RFC1P35251 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC1P35251 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
RFC1P35251 AC138932.1-201ENST00000534164 6830 ntBASIC21.12■□□□□ 0.97
RFC1P35251 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFC1P35251 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RFC1P35251 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFC1P35251 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.12■□□□□ 0.97
RFC1P35251 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFC1P35251 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFC1P35251 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RFC1P35251 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.12■□□□□ 0.97
RFC1P35251 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.12■□□□□ 0.97
RFC1P35251 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.12■□□□□ 0.97
RFC1P35251 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.12■□□□□ 0.97
RFC1P35251 AL121832.2-201ENST00000610979 668 ntBASIC21.12■□□□□ 0.97
RFC1P35251 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFC1P35251 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFC1P35251 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFC1P35251 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFC1P35251 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms