Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.16■□□□□ 0.98
CTNNA1P35221 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CTNNA1P35221 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTNNA1P35221 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNNA1P35221 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNNA1P35221 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.15■□□□□ 0.98
CTNNA1P35221 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNNA1P35221 BX119927.1-201ENST00000636596 1552 ntBASIC21.15■□□□□ 0.98
CTNNA1P35221 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNNA1P35221 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNNA1P35221 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CTNNA1P35221 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.15■□□□□ 0.98
CTNNA1P35221 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CTNNA1P35221 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.15■□□□□ 0.98
CTNNA1P35221 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CTNNA1P35221 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CTNNA1P35221 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNNA1P35221 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CTNNA1P35221 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CTNNA1P35221 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CTNNA1P35221 AC018445.3-201ENST00000624177 1945 ntBASIC21.15■□□□□ 0.98
CTNNA1P35221 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNNA1P35221 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTNNA1P35221 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CTNNA1P35221 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CTNNA1P35221 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTNNA1P35221 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
CTNNA1P35221 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTNNA1P35221 AL691432.2-201ENST00000607222 2038 ntBASIC21.14■□□□□ 0.98
CTNNA1P35221 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTNNA1P35221 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTNNA1P35221 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.14■□□□□ 0.98
CTNNA1P35221 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTNNA1P35221 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.98
CTNNA1P35221 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.14■□□□□ 0.97
CTNNA1P35221 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CTNNA1P35221 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.14■□□□□ 0.97
CTNNA1P35221 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.14■□□□□ 0.97
CTNNA1P35221 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CTNNA1P35221 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CTNNA1P35221 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNNA1P35221 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CTNNA1P35221 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CTNNA1P35221 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.13■□□□□ 0.97
CTNNA1P35221 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.13■□□□□ 0.97
CTNNA1P35221 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.13■□□□□ 0.97
CTNNA1P35221 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.13■□□□□ 0.97
CTNNA1P35221 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CTNNA1P35221 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
CTNNA1P35221 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.13■□□□□ 0.97
CTNNA1P35221 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.13■□□□□ 0.97
CTNNA1P35221 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.13■□□□□ 0.97
CTNNA1P35221 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.13■□□□□ 0.97
CTNNA1P35221 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CTNNA1P35221 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.13■□□□□ 0.97
CTNNA1P35221 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.13■□□□□ 0.97
CTNNA1P35221 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.13■□□□□ 0.97
CTNNA1P35221 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.13■□□□□ 0.97
CTNNA1P35221 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 AC116562.4-201ENST00000641316 2276 ntBASIC21.13■□□□□ 0.97
CTNNA1P35221 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.13■□□□□ 0.97
CTNNA1P35221 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNNA1P35221 AC087633.2-202ENST00000565166 1439 ntBASIC21.12■□□□□ 0.97
CTNNA1P35221 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTNNA1P35221 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CTNNA1P35221 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTNNA1P35221 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.12■□□□□ 0.97
CTNNA1P35221 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.12■□□□□ 0.97
CTNNA1P35221 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CTNNA1P35221 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTNNA1P35221 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.12■□□□□ 0.97
CTNNA1P35221 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTNNA1P35221 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTNNA1P35221 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.12■□□□□ 0.97
CTNNA1P35221 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.12■□□□□ 0.97
CTNNA1P35221 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.12■□□□□ 0.97
CTNNA1P35221 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CTNNA1P35221 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CTNNA1P35221 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms