Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCN1P31025 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.56■□□□□ 0.56
LCN1P31025 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCN1P31025 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
LCN1P31025 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LCN1P31025 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCN1P31025 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCN1P31025 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCN1P31025 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.55■□□□□ 0.56
LCN1P31025 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCN1P31025 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.55■□□□□ 0.56
LCN1P31025 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.55■□□□□ 0.56
LCN1P31025 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCN1P31025 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCN1P31025 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.55■□□□□ 0.56
LCN1P31025 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.55■□□□□ 0.56
LCN1P31025 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LCN1P31025 MIPEPP3-201ENST00000412105 444 ntBASIC18.55■□□□□ 0.56
LCN1P31025 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.55■□□□□ 0.56
LCN1P31025 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.55■□□□□ 0.56
LCN1P31025 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.55■□□□□ 0.56
LCN1P31025 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCN1P31025 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
LCN1P31025 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCN1P31025 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P31025 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P31025 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P31025 DPP3P2-201ENST00000416030 1696 ntBASIC18.54■□□□□ 0.56
LCN1P31025 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.54■□□□□ 0.56
LCN1P31025 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P31025 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P31025 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P31025 GUSBP6-202ENST00000438529 1198 ntBASIC18.54■□□□□ 0.56
LCN1P31025 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.54■□□□□ 0.56
LCN1P31025 AC023632.3-201ENST00000521633 145 ntBASIC18.54■□□□□ 0.56
LCN1P31025 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LCN1P31025 MIR4758-201ENST00000577688 71 ntBASIC18.54■□□□□ 0.56
LCN1P31025 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.54■□□□□ 0.56
LCN1P31025 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.54■□□□□ 0.56
LCN1P31025 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P31025 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LCN1P31025 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LCN1P31025 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LCN1P31025 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P31025 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P31025 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P31025 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.54■□□□□ 0.56
LCN1P31025 LINC01006-201ENST00000333319 2292 ntBASIC18.53■□□□□ 0.56
LCN1P31025 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P31025 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LCN1P31025 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P31025 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P31025 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LCN1P31025 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P31025 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LCN1P31025 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.53■□□□□ 0.56
LCN1P31025 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LCN1P31025 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.53■□□□□ 0.56
LCN1P31025 AC090192.1-201ENST00000517740 490 ntBASIC18.53■□□□□ 0.56
LCN1P31025 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.53■□□□□ 0.56
LCN1P31025 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.53■□□□□ 0.56
LCN1P31025 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LCN1P31025 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.53■□□□□ 0.56
LCN1P31025 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LCN1P31025 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P31025 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P31025 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LCN1P31025 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P31025 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.52■□□□□ 0.56
LCN1P31025 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.52■□□□□ 0.56
LCN1P31025 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LCN1P31025 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
LCN1P31025 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.52■□□□□ 0.56
LCN1P31025 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P31025 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
LCN1P31025 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P31025 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P31025 AC073210.2-201ENST00000430369 194 ntBASIC18.52■□□□□ 0.56
LCN1P31025 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LCN1P31025 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.52■□□□□ 0.56
LCN1P31025 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.52■□□□□ 0.56
LCN1P31025 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P31025 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.52■□□□□ 0.56
LCN1P31025 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P31025 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P31025 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
LCN1P31025 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
LCN1P31025 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
LCN1P31025 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LCN1P31025 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
LCN1P31025 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.52■□□□□ 0.55
LCN1P31025 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LCN1P31025 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LCN1P31025 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
LCN1P31025 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LCN1P31025 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P31025 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P31025 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P31025 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P31025 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms