Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CD40P25942 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD40P25942 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD40P25942 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD40P25942 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CD40P25942 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD40P25942 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD40P25942 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CD40P25942 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.34■□□□□ 0.37
CD40P25942 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CD40P25942 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.34■□□□□ 0.37
CD40P25942 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD40P25942 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.34■□□□□ 0.37
CD40P25942 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD40P25942 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD40P25942 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.34■□□□□ 0.37
CD40P25942 AL023875.1-201ENST00000640777 796 ntBASIC17.34■□□□□ 0.37
CD40P25942 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CD40P25942 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD40P25942 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.33■□□□□ 0.37
CD40P25942 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CD40P25942 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.33■□□□□ 0.37
CD40P25942 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.33■□□□□ 0.37
CD40P25942 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD40P25942 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD40P25942 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD40P25942 KRT8P20-201ENST00000423953 1409 ntBASIC17.33■□□□□ 0.36
CD40P25942 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CD40P25942 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.33■□□□□ 0.36
CD40P25942 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD40P25942 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CD40P25942 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.33■□□□□ 0.36
CD40P25942 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CD40P25942 AC239809.2-201ENST00000415381 517 ntBASIC17.33■□□□□ 0.36
CD40P25942 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.33■□□□□ 0.36
CD40P25942 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.33■□□□□ 0.36
CD40P25942 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.33■□□□□ 0.36
CD40P25942 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.33■□□□□ 0.36
CD40P25942 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.33■□□□□ 0.36
CD40P25942 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CD40P25942 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.33■□□□□ 0.36
CD40P25942 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.33■□□□□ 0.36
CD40P25942 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.33■□□□□ 0.36
CD40P25942 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.33■□□□□ 0.36
CD40P25942 AL031963.3-201ENST00000606441 850 ntBASIC17.33■□□□□ 0.36
CD40P25942 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD40P25942 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CD40P25942 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.33■□□□□ 0.36
CD40P25942 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD40P25942 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CD40P25942 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CD40P25942 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD40P25942 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD40P25942 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CD40P25942 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.32■□□□□ 0.36
CD40P25942 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.32■□□□□ 0.36
CD40P25942 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.32■□□□□ 0.36
CD40P25942 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.32■□□□□ 0.36
CD40P25942 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 RPS2P4-201ENST00000476944 856 ntBASIC17.32■□□□□ 0.36
CD40P25942 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.32■□□□□ 0.36
CD40P25942 AC008550.1-201ENST00000511500 884 ntBASIC17.32■□□□□ 0.36
CD40P25942 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CD40P25942 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 PRKY-204ENST00000533551 1019 ntBASIC17.32■□□□□ 0.36
CD40P25942 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.32■□□□□ 0.36
CD40P25942 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 AC124016.1-201ENST00000609552 612 ntBASIC17.32■□□□□ 0.36
CD40P25942 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.32■□□□□ 0.36
CD40P25942 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CD40P25942 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD40P25942 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD40P25942 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.31■□□□□ 0.36
CD40P25942 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms