Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FAM197Y4-202ENST00000622692 608 ntBASIC16.98■□□□□ 0.31
COL8A2P25067 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.98■□□□□ 0.31
COL8A2P25067 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
COL8A2P25067 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL8A2P25067 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.98■□□□□ 0.31
COL8A2P25067 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
COL8A2P25067 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
COL8A2P25067 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.97■□□□□ 0.31
COL8A2P25067 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COL8A2P25067 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
COL8A2P25067 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.97■□□□□ 0.31
COL8A2P25067 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COL8A2P25067 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.97■□□□□ 0.31
COL8A2P25067 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL8A2P25067 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL8A2P25067 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.96■□□□□ 0.31
COL8A2P25067 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL8A2P25067 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL8A2P25067 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL8A2P25067 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL8A2P25067 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL8A2P25067 UBE2SP1-201ENST00000450587 669 ntBASIC16.96■□□□□ 0.31
COL8A2P25067 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.96■□□□□ 0.31
COL8A2P25067 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL8A2P25067 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL8A2P25067 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.96■□□□□ 0.31
COL8A2P25067 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
COL8A2P25067 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.96■□□□□ 0.31
COL8A2P25067 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.96■□□□□ 0.31
COL8A2P25067 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.96■□□□□ 0.31
COL8A2P25067 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.96■□□□□ 0.31
COL8A2P25067 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.96■□□□□ 0.31
COL8A2P25067 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.96■□□□□ 0.31
COL8A2P25067 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.96■□□□□ 0.31
COL8A2P25067 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.96■□□□□ 0.3
COL8A2P25067 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL8A2P25067 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.96■□□□□ 0.3
COL8A2P25067 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
COL8A2P25067 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
COL8A2P25067 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL8A2P25067 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.95■□□□□ 0.3
COL8A2P25067 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.95■□□□□ 0.3
COL8A2P25067 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.95■□□□□ 0.3
COL8A2P25067 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.95■□□□□ 0.3
COL8A2P25067 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.95■□□□□ 0.3
COL8A2P25067 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
COL8A2P25067 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
COL8A2P25067 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.95■□□□□ 0.3
COL8A2P25067 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.95■□□□□ 0.3
COL8A2P25067 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.95■□□□□ 0.3
COL8A2P25067 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
COL8A2P25067 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL8A2P25067 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COL8A2P25067 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COL8A2P25067 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.94■□□□□ 0.3
COL8A2P25067 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL8A2P25067 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.94■□□□□ 0.3
COL8A2P25067 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL8A2P25067 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
COL8A2P25067 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL8A2P25067 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.94■□□□□ 0.3
COL8A2P25067 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.94■□□□□ 0.3
COL8A2P25067 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL8A2P25067 AC023632.3-201ENST00000521633 145 ntBASIC16.94■□□□□ 0.3
COL8A2P25067 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.94■□□□□ 0.3
COL8A2P25067 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.94■□□□□ 0.3
COL8A2P25067 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.94■□□□□ 0.3
COL8A2P25067 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.94■□□□□ 0.3
COL8A2P25067 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COL8A2P25067 MTDHP1-201ENST00000605323 784 ntBASIC16.94■□□□□ 0.3
COL8A2P25067 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.94■□□□□ 0.3
COL8A2P25067 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.94■□□□□ 0.3
COL8A2P25067 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms