Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 MCM10YIL150C 1716 nt-0.56□□□□□ -2.5
TY1B-PR3P0C2J1 GIM5YML094W 492 nt-0.56□□□□□ -2.5
TY1B-PR3P0C2J1 DCP1YOL149W 696 nt-0.56□□□□□ -2.5
TY1B-PR3P0C2J1 snR33snR33 183 nt-0.56□□□□□ -2.5
TY1B-PR3P0C2J1 snR44snR44 211 nt-0.56□□□□□ -2.5
TY1B-PR3P0C2J1 YCR038W-AYCR038W-A 126 nt-0.57□□□□□ -2.5
TY1B-PR3P0C2J1 YER188C-AYER188C-A 300 nt-0.57□□□□□ -2.5
TY1B-PR3P0C2J1 YGL258W-AYGL258W-A 234 nt-0.57□□□□□ -2.5
TY1B-PR3P0C2J1 GPX1YKL026C 504 nt-0.57□□□□□ -2.5
TY1B-PR3P0C2J1 PBI2YNL015W 228 nt-0.57□□□□□ -2.5
TY1B-PR3P0C2J1 YFR012W-AYFR012W-A 87 nt-0.58□□□□□ -2.5
TY1B-PR3P0C2J1 COX7YMR256C 183 nt-0.58□□□□□ -2.5
TY1B-PR3P0C2J1 SDS22YKL193C 1017 nt-0.59□□□□□ -2.5
TY1B-PR3P0C2J1 COY1YKL179C 2040 nt-0.59□□□□□ -2.5
TY1B-PR3P0C2J1 YAP6YDR259C 1152 nt-0.6□□□□□ -2.5
TY1B-PR3P0C2J1 YOR248WYOR248W 303 nt-0.6□□□□□ -2.5
TY1B-PR3P0C2J1 PAA1YDR071C 576 nt-0.6□□□□□ -2.51
TY1B-PR3P0C2J1 YBR223W-AYBR223W-A 120 nt-0.6□□□□□ -2.51
TY1B-PR3P0C2J1 YPL205CYPL205C 345 nt-0.61□□□□□ -2.51
TY1B-PR3P0C2J1 YLL006W-AYLL006W-A 177 nt-0.62□□□□□ -2.51
TY1B-PR3P0C2J1 YMR304C-AYMR304C-A 351 nt-0.62□□□□□ -2.51
TY1B-PR3P0C2J1 YPL119C-AYPL119C-A 264 nt-0.62□□□□□ -2.51
TY1B-PR3P0C2J1 YHR054CYHR054C 1065 nt-0.62□□□□□ -2.51
TY1B-PR3P0C2J1 LRP1YHR081W 555 nt-0.62□□□□□ -2.51
TY1B-PR3P0C2J1 ECL1YGR146C 636 nt-0.63□□□□□ -2.51
TY1B-PR3P0C2J1 PSF2YJL072C 642 nt-0.63□□□□□ -2.51
TY1B-PR3P0C2J1 DIE2YGR227W 1578 nt-0.63□□□□□ -2.51
TY1B-PR3P0C2J1 QCR7YDR529C 384 nt-0.64□□□□□ -2.51
TY1B-PR3P0C2J1 BLS1YLR408C 369 nt-0.64□□□□□ -2.51
TY1B-PR3P0C2J1 SNU56YDR240C 1479 nt-0.65□□□□□ -2.51
TY1B-PR3P0C2J1 ATC1YDR184C 885 nt-0.65□□□□□ -2.51
TY1B-PR3P0C2J1 YER076W-AYER076W-A 348 nt-0.65□□□□□ -2.51
TY1B-PR3P0C2J1 YNL067W-AYNL067W-A 147 nt-0.65□□□□□ -2.51
TY1B-PR3P0C2J1 YHL046W-AYHL046W-A 327 nt-0.66□□□□□ -2.52
TY1B-PR3P0C2J1 YOR020W-AYOR020W-A 273 nt-0.66□□□□□ -2.52
TY1B-PR3P0C2J1 IRC16YPR038W 360 nt-0.66□□□□□ -2.52
TY1B-PR3P0C2J1 YLR171WYLR171W 390 nt-0.67□□□□□ -2.52
TY1B-PR3P0C2J1 YNL067W-BYNL067W-B 141 nt-0.67□□□□□ -2.52
TY1B-PR3P0C2J1 IPP1YBR011C 864 nt-0.67□□□□□ -2.52
TY1B-PR3P0C2J1 YDR269CYDR269C 324 nt-0.68□□□□□ -2.52
TY1B-PR3P0C2J1 TIM13YGR181W 318 nt-0.68□□□□□ -2.52
TY1B-PR3P0C2J1 CWC23YGL128C 852 nt-0.68□□□□□ -2.52
TY1B-PR3P0C2J1 VAM3YOR106W 852 nt-0.68□□□□□ -2.52
TY1B-PR3P0C2J1 YHR138CYHR138C 345 nt-0.69□□□□□ -2.52
TY1B-PR3P0C2J1 YKL111CYKL111C 336 nt-0.69□□□□□ -2.52
TY1B-PR3P0C2J1 YMR075C-AYMR075C-A 366 nt-0.69□□□□□ -2.52
TY1B-PR3P0C2J1 MRPS8YMR158W 468 nt-0.69□□□□□ -2.52
TY1B-PR3P0C2J1 GRX5YPL059W 453 nt-0.69□□□□□ -2.52
TY1B-PR3P0C2J1 RRI2YOL117W 1938 nt-0.69□□□□□ -2.52
TY1B-PR3P0C2J1 YGR115CYGR115C 780 nt-0.7□□□□□ -2.52
TY1B-PR3P0C2J1 YMR307C-AYMR307C-A 195 nt-0.7□□□□□ -2.52
TY1B-PR3P0C2J1 YOR011W-AYOR011W-A 207 nt-0.7□□□□□ -2.52
TY1B-PR3P0C2J1 SPO21YOL091W 1830 nt-0.7□□□□□ -2.52
TY1B-PR3P0C2J1 YHR050W-AYHR050W-A 171 nt-0.7□□□□□ -2.52
TY1B-PR3P0C2J1 ACF4YJR083C 930 nt-0.7□□□□□ -2.52
TY1B-PR3P0C2J1 SPC24YMR117C 642 nt-0.7□□□□□ -2.52
TY1B-PR3P0C2J1 LOC1YFR001W 615 nt-0.71□□□□□ -2.52
TY1B-PR3P0C2J1 YLR198CYLR198C 360 nt-0.72□□□□□ -2.52
TY1B-PR3P0C2J1 YHR131W-AYHR131W-A 246 nt-0.73□□□□□ -2.53
TY1B-PR3P0C2J1 ILM1YJR118C 612 nt-0.73□□□□□ -2.53
TY1B-PR3P0C2J1 YKL202WYKL202W 582 nt-0.73□□□□□ -2.53
TY1B-PR3P0C2J1 YNL319WYNL319W 441 nt-0.73□□□□□ -2.53
TY1B-PR3P0C2J1 YPL261CYPL261C 309 nt-0.73□□□□□ -2.53
TY1B-PR3P0C2J1 YCR022CYCR022C 345 nt-0.73□□□□□ -2.53
TY1B-PR3P0C2J1 RPS30AYLR287C-A 192 nt-0.73□□□□□ -2.53
TY1B-PR3P0C2J1 POL32YJR043C 1053 nt-0.74□□□□□ -2.53
TY1B-PR3P0C2J1 YOR345CYOR345C 351 nt-0.74□□□□□ -2.53
TY1B-PR3P0C2J1 PTP2YOR208W 2253 nt-0.74□□□□□ -2.53
TY1B-PR3P0C2J1 YER138W-AYER138W-A 105 nt-0.75□□□□□ -2.53
TY1B-PR3P0C2J1 snR51snR51 107 nt-0.75□□□□□ -2.53
TY1B-PR3P0C2J1 YKL068W-AYKL068W-A 237 nt-0.75□□□□□ -2.53
TY1B-PR3P0C2J1 YLR163W-AYLR163W-A 114 nt-0.75□□□□□ -2.53
TY1B-PR3P0C2J1 YML108WYML108W 318 nt-0.75□□□□□ -2.53
TY1B-PR3P0C2J1 YNL146C-AYNL146C-A 195 nt-0.75□□□□□ -2.53
TY1B-PR3P0C2J1 snR36snR36 182 nt-0.75□□□□□ -2.53
TY1B-PR3P0C2J1 YIL071W-AYIL071W-A 477 nt-0.76□□□□□ -2.53
TY1B-PR3P0C2J1 tA(UGC)QtA(UGC)Q 76 nt-0.77□□□□□ -2.53
TY1B-PR3P0C2J1 YIR044CYIR044C 186 nt-0.77□□□□□ -2.53
TY1B-PR3P0C2J1 YLR287CYLR287C 1068 nt-0.77□□□□□ -2.53
TY1B-PR3P0C2J1 YCR018C-AYCR018C-A 255 nt-0.78□□□□□ -2.53
TY1B-PR3P0C2J1 SRB7YDR308C 423 nt-0.78□□□□□ -2.53
TY1B-PR3P0C2J1 YBR099CYBR099C 384 nt-0.78□□□□□ -2.53
TY1B-PR3P0C2J1 YDL185C-AYDL185C-A 228 nt-0.79□□□□□ -2.54
TY1B-PR3P0C2J1 ATG31YDR022C 591 nt-0.79□□□□□ -2.54
TY1B-PR3P0C2J1 RPS20YHL015W 366 nt-0.79□□□□□ -2.54
TY1B-PR3P0C2J1 YOR364WYOR364W 369 nt-0.79□□□□□ -2.54
TY1B-PR3P0C2J1 YOR366WYOR366W 354 nt-0.79□□□□□ -2.54
TY1B-PR3P0C2J1 PCF11YDR228C 1881 nt-0.8□□□□□ -2.54
TY1B-PR3P0C2J1 tN(GUU)QtN(GUU)Q 71 nt-0.8□□□□□ -2.54
TY1B-PR3P0C2J1 BER1YLR412W 825 nt-0.8□□□□□ -2.54
TY1B-PR3P0C2J1 YOL029CYOL029C 606 nt-0.8□□□□□ -2.54
TY1B-PR3P0C2J1 YPR096CYPR096C 303 nt-0.8□□□□□ -2.54
TY1B-PR3P0C2J1 YGR228WYGR228W 345 nt-0.8□□□□□ -2.54
TY1B-PR3P0C2J1 BUD26YDR241W 288 nt-0.81□□□□□ -2.54
TY1B-PR3P0C2J1 YGL239CYGL239C 315 nt-0.81□□□□□ -2.54
TY1B-PR3P0C2J1 snR34snR34 203 nt-0.82□□□□□ -2.54
TY1B-PR3P0C2J1 HUR1YGL168W 333 nt-0.83□□□□□ -2.54
TY1B-PR3P0C2J1 YHL041WYHL041W 450 nt-0.83□□□□□ -2.54
TY1B-PR3P0C2J1 YMR013C-AYMR013C-A 150 nt-0.83□□□□□ -2.54
TY1B-PR3P0C2J1 YBL107W-AYBL107W-A 105 nt-0.83□□□□□ -2.54
Retrieved 100 of 7,029 protein–RNA pairs in 72.6 ms