Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MRPL3P09001 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MRPL3P09001 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.98■□□□□ 0.47
MRPL3P09001 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.98■□□□□ 0.47
MRPL3P09001 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MRPL3P09001 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MRPL3P09001 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
MRPL3P09001 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MRPL3P09001 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.97■□□□□ 0.47
MRPL3P09001 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPL3P09001 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPL3P09001 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.97■□□□□ 0.47
MRPL3P09001 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.97■□□□□ 0.47
MRPL3P09001 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.97■□□□□ 0.47
MRPL3P09001 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
MRPL3P09001 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPL3P09001 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.97■□□□□ 0.47
MRPL3P09001 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPL3P09001 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MRPL3P09001 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.97■□□□□ 0.47
MRPL3P09001 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.97■□□□□ 0.47
MRPL3P09001 TERF1P2-201ENST00000583350 1212 ntBASIC17.97■□□□□ 0.47
MRPL3P09001 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.97■□□□□ 0.47
MRPL3P09001 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPL3P09001 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.97■□□□□ 0.47
MRPL3P09001 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPL3P09001 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MRPL3P09001 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPL3P09001 RBM17P2-201ENST00000616397 1405 ntBASIC17.97■□□□□ 0.47
MRPL3P09001 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.97■□□□□ 0.47
MRPL3P09001 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPL3P09001 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPL3P09001 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
MRPL3P09001 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.96■□□□□ 0.47
MRPL3P09001 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.96■□□□□ 0.47
MRPL3P09001 AC005837.3-201ENST00000612163 286 ntBASIC17.96■□□□□ 0.47
MRPL3P09001 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.96■□□□□ 0.47
MRPL3P09001 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPL3P09001 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.96■□□□□ 0.47
MRPL3P09001 BX119927.1-201ENST00000636596 1552 ntBASIC17.96■□□□□ 0.46
MRPL3P09001 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
MRPL3P09001 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.95■□□□□ 0.46
MRPL3P09001 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.95■□□□□ 0.46
MRPL3P09001 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.95■□□□□ 0.46
MRPL3P09001 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.95■□□□□ 0.46
MRPL3P09001 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.95■□□□□ 0.46
MRPL3P09001 FAM21FP-204ENST00000608637 956 ntBASIC17.95■□□□□ 0.46
MRPL3P09001 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.95■□□□□ 0.46
MRPL3P09001 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 AL020996.1-203ENST00000536896 2307 ntBASIC17.95■□□□□ 0.46
MRPL3P09001 AC004854.2-201ENST00000608450 1441 ntBASIC17.95■□□□□ 0.46
MRPL3P09001 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.95■□□□□ 0.46
MRPL3P09001 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.95■□□□□ 0.46
MRPL3P09001 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPL3P09001 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPL3P09001 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.94■□□□□ 0.46
MRPL3P09001 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.94■□□□□ 0.46
MRPL3P09001 AC098818.2-201ENST00000564925 2320 ntBASIC17.94■□□□□ 0.46
MRPL3P09001 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPL3P09001 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
MRPL3P09001 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.94■□□□□ 0.46
MRPL3P09001 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.94■□□□□ 0.46
MRPL3P09001 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.94■□□□□ 0.46
MRPL3P09001 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MRPL3P09001 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MRPL3P09001 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.94■□□□□ 0.46
MRPL3P09001 KRT18P20-201ENST00000548986 1279 ntBASIC17.94■□□□□ 0.46
MRPL3P09001 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
MRPL3P09001 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.94■□□□□ 0.46
MRPL3P09001 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPL3P09001 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms