Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 RPB10YOR210W 213 nt0.79□□□□□ -2.28
RAD3P06839 PCF11YDR228C 1881 nt0.79□□□□□ -2.28
RAD3P06839 SLI15YBR156C 2097 nt0.78□□□□□ -2.28
RAD3P06839 YAR047CYAR047C 321 nt0.78□□□□□ -2.28
RAD3P06839 SEC1YDR164C 2175 nt0.78□□□□□ -2.28
RAD3P06839 YMR160WYMR160W 2451 nt0.78□□□□□ -2.28
RAD3P06839 YPL229WYPL229W 621 nt0.77□□□□□ -2.29
RAD3P06839 YDL196WYDL196W 330 nt0.76□□□□□ -2.29
RAD3P06839 NHP2YDL208W 471 nt0.76□□□□□ -2.29
RAD3P06839 Q0144Q0144 330 nt0.76□□□□□ -2.29
RAD3P06839 RPS20YHL015W 366 nt0.76□□□□□ -2.29
RAD3P06839 YJL007CYJL007C 315 nt0.76□□□□□ -2.29
RAD3P06839 PRM3YPL192C 402 nt0.76□□□□□ -2.29
RAD3P06839 YPL205CYPL205C 345 nt0.76□□□□□ -2.29
RAD3P06839 PRP16YKR086W 3216 nt0.76□□□□□ -2.29
RAD3P06839 RAD34YDR314C 2079 nt0.76□□□□□ -2.29
RAD3P06839 NIP100YPL174C 2607 nt0.75□□□□□ -2.29
RAD3P06839 YPL185WYPL185W 396 nt0.75□□□□□ -2.29
RAD3P06839 MYO1YHR023W 5787 nt0.75□□□□□ -2.29
RAD3P06839 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
RAD3P06839 YER079WYER079W 633 nt0.74□□□□□ -2.29
RAD3P06839 YMR272W-AYMR272W-A 114 nt0.74□□□□□ -2.29
RAD3P06839 ATG31YDR022C 591 nt0.73□□□□□ -2.29
RAD3P06839 SWF1YDR126W 1011 nt0.73□□□□□ -2.29
RAD3P06839 YJR011CYJR011C 786 nt0.73□□□□□ -2.29
RAD3P06839 YPL261CYPL261C 309 nt0.73□□□□□ -2.29
RAD3P06839 WAR1YML076C 2835 nt0.73□□□□□ -2.29
RAD3P06839 PAN2YGL094C 3348 nt0.72□□□□□ -2.29
RAD3P06839 VPS20YMR077C 666 nt0.72□□□□□ -2.29
RAD3P06839 INP2YMR163C 2118 nt0.72□□□□□ -2.29
RAD3P06839 YPL068CYPL068C 882 nt0.72□□□□□ -2.29
RAD3P06839 GEA2YEL022W 4380 nt0.71□□□□□ -2.3
RAD3P06839 YDR521WYDR521W 336 nt0.71□□□□□ -2.3
RAD3P06839 CMC4YMR194C-B 222 nt0.71□□□□□ -2.3
RAD3P06839 YOR108C-AYOR108C-A 210 nt0.71□□□□□ -2.3
RAD3P06839 YBR206WYBR206W 324 nt0.71□□□□□ -2.3
RAD3P06839 YMR031W-AYMR031W-A 327 nt0.7□□□□□ -2.3
RAD3P06839 YNL058CYNL058C 951 nt0.7□□□□□ -2.3
RAD3P06839 YBR064WYBR064W 429 nt0.7□□□□□ -2.3
RAD3P06839 PKH2YOL100W 3246 nt0.7□□□□□ -2.3
RAD3P06839 BFR2YDR299W 1605 nt0.69□□□□□ -2.3
RAD3P06839 ALG13YGL047W 609 nt0.69□□□□□ -2.3
RAD3P06839 GPG1YGL121C 381 nt0.69□□□□□ -2.3
RAD3P06839 YGR174W-AYGR174W-A 87 nt0.69□□□□□ -2.3
RAD3P06839 YHL042WYHL042W 453 nt0.69□□□□□ -2.3
RAD3P06839 MAM33YIL070C 801 nt0.69□□□□□ -2.3
RAD3P06839 CSN9YDR179C 489 nt0.68□□□□□ -2.3
RAD3P06839 ISD11YER048W-A 285 nt0.68□□□□□ -2.3
RAD3P06839 YMR290W-AYMR290W-A 348 nt0.68□□□□□ -2.3
RAD3P06839 YPR002C-AYPR002C-A 198 nt0.68□□□□□ -2.3
RAD3P06839 YDR426CYDR426C 378 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)BtT(AGU)B 73 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)CtT(AGU)C 73 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)DtT(AGU)D 73 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)HtT(AGU)H 73 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)I1tT(AGU)I1 73 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)I2tT(AGU)I2 73 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)JtT(AGU)J 73 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)N1tT(AGU)N1 73 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)N2tT(AGU)N2 73 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)O1tT(AGU)O1 73 nt0.67□□□□□ -2.3
RAD3P06839 tT(AGU)O2tT(AGU)O2 73 nt0.67□□□□□ -2.3
RAD3P06839 YBR285WYBR285W 435 nt0.67□□□□□ -2.3
RAD3P06839 DBP6YNR038W 1890 nt0.67□□□□□ -2.3
RAD3P06839 YER137W-AYER137W-A 306 nt0.66□□□□□ -2.3
RAD3P06839 YHR138CYHR138C 345 nt0.66□□□□□ -2.3
RAD3P06839 LTE1YAL024C 4308 nt0.66□□□□□ -2.3
RAD3P06839 MCM10YIL150C 1716 nt0.65□□□□□ -2.31
RAD3P06839 YML007C-AYML007C-A 111 nt0.65□□□□□ -2.31
RAD3P06839 YMR321CYMR321C 318 nt0.65□□□□□ -2.31
RAD3P06839 IES4YOR189W 351 nt0.65□□□□□ -2.31
RAD3P06839 YOR293C-AYOR293C-A 150 nt0.65□□□□□ -2.31
RAD3P06839 YPR159C-AYPR159C-A 102 nt0.65□□□□□ -2.31
RAD3P06839 ASE1YOR058C 2658 nt0.65□□□□□ -2.31
RAD3P06839 YDR344CYDR344C 444 nt0.64□□□□□ -2.31
RAD3P06839 AGA2YGL032C 264 nt0.64□□□□□ -2.31
RAD3P06839 YKL063CYKL063C 504 nt0.64□□□□□ -2.31
RAD3P06839 RPL38YLR325C 237 nt0.64□□□□□ -2.31
RAD3P06839 LEE1YPL054W 906 nt0.64□□□□□ -2.31
RAD3P06839 TRS65YGR166W 1683 nt0.63□□□□□ -2.31
RAD3P06839 YLR264C-AYLR264C-A 117 nt0.63□□□□□ -2.31
RAD3P06839 BSC3YLR465C 309 nt0.63□□□□□ -2.31
RAD3P06839 YNL324WYNL324W 396 nt0.62□□□□□ -2.31
RAD3P06839 YLL007CYLL007C 1998 nt0.61□□□□□ -2.31
RAD3P06839 NOP9YJL010C 2001 nt0.61□□□□□ -2.31
RAD3P06839 YOR218CYOR218C 420 nt0.61□□□□□ -2.31
RAD3P06839 YML002WYML002W 2214 nt0.6□□□□□ -2.31
RAD3P06839 YHR063W-AYHR063W-A 336 nt0.6□□□□□ -2.31
RAD3P06839 YOR282WYOR282W 321 nt0.6□□□□□ -2.31
RAD3P06839 CUL3YGR003W 2235 nt0.6□□□□□ -2.31
RAD3P06839 YFR012W-AYFR012W-A 87 nt0.59□□□□□ -2.31
RAD3P06839 YLR334CYLR334C 381 nt0.59□□□□□ -2.31
RAD3P06839 YOR121CYOR121C 306 nt0.59□□□□□ -2.31
RAD3P06839 OLI1Q0130 231 nt0.58□□□□□ -2.32
RAD3P06839 ECM12YHR021W-A 456 nt0.58□□□□□ -2.32
RAD3P06839 tW(UCA)QtW(UCA)Q 74 nt0.58□□□□□ -2.32
RAD3P06839 YIR044CYIR044C 186 nt0.58□□□□□ -2.32
RAD3P06839 YLR222C-AYLR222C-A 231 nt0.58□□□□□ -2.32
RAD3P06839 PMP1YCR024C-A 123 nt0.57□□□□□ -2.32
RAD3P06839 YOR053WYOR053W 342 nt0.57□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 29.5 ms