Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.39■□□□□ 0.86
HLA-DQB2P05538 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.39■□□□□ 0.86
HLA-DQB2P05538 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
HLA-DQB2P05538 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-DQB2P05538 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.39■□□□□ 0.86
HLA-DQB2P05538 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-DQB2P05538 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 KRT8P17-201ENST00000453110 1448 ntBASIC20.39■□□□□ 0.85
HLA-DQB2P05538 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 AC069152.1-201ENST00000438030 544 ntBASIC20.39■□□□□ 0.85
HLA-DQB2P05538 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 AL031963.3-201ENST00000606441 850 ntBASIC20.39■□□□□ 0.85
HLA-DQB2P05538 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 TCF3P1-201ENST00000423021 1937 ntBASIC20.39■□□□□ 0.85
HLA-DQB2P05538 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DQB2P05538 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 AC083880.1-201ENST00000608266 535 ntBASIC20.38■□□□□ 0.85
HLA-DQB2P05538 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DQB2P05538 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 AC073210.2-201ENST00000430369 194 ntBASIC20.37■□□□□ 0.85
HLA-DQB2P05538 AC097658.1-201ENST00000475555 843 ntBASIC20.37■□□□□ 0.85
HLA-DQB2P05538 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQB2P05538 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 KRT8P20-201ENST00000423953 1409 ntBASIC20.36■□□□□ 0.85
HLA-DQB2P05538 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 AC023632.3-201ENST00000521633 145 ntBASIC20.36■□□□□ 0.85
HLA-DQB2P05538 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 AC133041.1-202ENST00000642053 222 ntBASIC20.36■□□□□ 0.85
HLA-DQB2P05538 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQB2P05538 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms