Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.39■□□□□ 0.86
MT-ND3P03897 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND3P03897 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND3P03897 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.39■□□□□ 0.85
MT-ND3P03897 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND3P03897 MIR2861-201ENST00000636310 90 ntBASIC20.39■□□□□ 0.85
MT-ND3P03897 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND3P03897 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.39■□□□□ 0.85
MT-ND3P03897 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.39■□□□□ 0.85
MT-ND3P03897 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND3P03897 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
MT-ND3P03897 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND3P03897 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND3P03897 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.39■□□□□ 0.85
MT-ND3P03897 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.39■□□□□ 0.85
MT-ND3P03897 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.39■□□□□ 0.85
MT-ND3P03897 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
MT-ND3P03897 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
MT-ND3P03897 AC116562.4-201ENST00000641316 2276 ntBASIC20.38■□□□□ 0.85
MT-ND3P03897 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.38■□□□□ 0.85
MT-ND3P03897 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.38■□□□□ 0.85
MT-ND3P03897 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 AC006970.2-201ENST00000450065 779 ntBASIC20.38■□□□□ 0.85
MT-ND3P03897 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.38■□□□□ 0.85
MT-ND3P03897 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.38■□□□□ 0.85
MT-ND3P03897 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.38■□□□□ 0.85
MT-ND3P03897 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND3P03897 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
MT-ND3P03897 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND3P03897 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND3P03897 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.37■□□□□ 0.85
MT-ND3P03897 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND3P03897 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND3P03897 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND3P03897 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND3P03897 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.37■□□□□ 0.85
MT-ND3P03897 AC104187.1-201ENST00000607510 612 ntBASIC20.37■□□□□ 0.85
MT-ND3P03897 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND3P03897 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND3P03897 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND3P03897 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.37■□□□□ 0.85
MT-ND3P03897 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND3P03897 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.36■□□□□ 0.85
MT-ND3P03897 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
MT-ND3P03897 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
MT-ND3P03897 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MT-ND3P03897 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.36■□□□□ 0.85
MT-ND3P03897 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.36■□□□□ 0.85
MT-ND3P03897 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.36■□□□□ 0.85
MT-ND3P03897 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
MT-ND3P03897 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.36■□□□□ 0.85
MT-ND3P03897 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MT-ND3P03897 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.36■□□□□ 0.85
MT-ND3P03897 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
MT-ND3P03897 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND3P03897 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
MT-ND3P03897 AC125437.2-201ENST00000625180 2167 ntBASIC20.35■□□□□ 0.85
MT-ND3P03897 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.35■□□□□ 0.85
MT-ND3P03897 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.35■□□□□ 0.85
MT-ND3P03897 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.35■□□□□ 0.85
MT-ND3P03897 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND3P03897 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms