Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 BX842568.3-201ENST00000418104 571 ntBASIC17.34■□□□□ 0.37
HLA-DQB1P01920 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB1P01920 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB1P01920 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB1P01920 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB1P01920 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-DQB1P01920 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB1P01920 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 AL390961.4-201ENST00000623958 2535 ntBASIC17.33■□□□□ 0.36
HLA-DQB1P01920 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DQB1P01920 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 AL032819.2-201ENST00000624543 2162 ntBASIC17.32■□□□□ 0.36
HLA-DQB1P01920 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 EEF1DP3-203ENST00000566025 782 ntBASIC17.32■□□□□ 0.36
HLA-DQB1P01920 AC053503.5-201ENST00000601508 636 ntBASIC17.32■□□□□ 0.36
HLA-DQB1P01920 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 AC135050.7-201ENST00000624508 2218 ntBASIC17.32■□□□□ 0.36
HLA-DQB1P01920 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 BX119927.1-201ENST00000636596 1552 ntBASIC17.32■□□□□ 0.36
HLA-DQB1P01920 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HLA-DQB1P01920 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DQB1P01920 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQB1P01920 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms