Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF2O60811 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PRAMEF2O60811 AC098590.1-201ENST00000468126 897 ntBASIC18.84■□□□□ 0.61
PRAMEF2O60811 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF2O60811 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PRAMEF2O60811 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEF2O60811 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.84■□□□□ 0.61
PRAMEF2O60811 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF2O60811 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEF2O60811 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAMEF2O60811 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.84■□□□□ 0.61
PRAMEF2O60811 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF2O60811 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PRAMEF2O60811 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF2O60811 AL157384.1-201ENST00000445995 2473 ntBASIC18.83■□□□□ 0.61
PRAMEF2O60811 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF2O60811 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF2O60811 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF2O60811 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEF2O60811 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF2O60811 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF2O60811 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF2O60811 GCSHP5-201ENST00000443090 522 ntBASIC18.83■□□□□ 0.6
PRAMEF2O60811 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEF2O60811 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF2O60811 RPS2P52-201ENST00000469610 820 ntBASIC18.83■□□□□ 0.6
PRAMEF2O60811 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
PRAMEF2O60811 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEF2O60811 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.83■□□□□ 0.6
PRAMEF2O60811 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF2O60811 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF2O60811 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF2O60811 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF2O60811 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEF2O60811 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF2O60811 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF2O60811 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF2O60811 LINC01521-201ENST00000504184 1943 ntBASIC18.82■□□□□ 0.6
PRAMEF2O60811 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF2O60811 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF2O60811 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF2O60811 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF2O60811 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF2O60811 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF2O60811 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF2O60811 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PRAMEF2O60811 LINC01006-201ENST00000333319 2292 ntBASIC18.81■□□□□ 0.6
PRAMEF2O60811 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.81■□□□□ 0.6
PRAMEF2O60811 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 AL158047.1-201ENST00000445918 881 ntBASIC18.81■□□□□ 0.6
PRAMEF2O60811 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.81■□□□□ 0.6
PRAMEF2O60811 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEF2O60811 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.81■□□□□ 0.6
PRAMEF2O60811 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEF2O60811 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEF2O60811 AC073648.6-201ENST00000641589 218 ntBASIC18.81■□□□□ 0.6
PRAMEF2O60811 AP006294.2-201ENST00000641667 209 ntBASIC18.81■□□□□ 0.6
PRAMEF2O60811 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF2O60811 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF2O60811 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF2O60811 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF2O60811 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF2O60811 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF2O60811 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF2O60811 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
PRAMEF2O60811 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF2O60811 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF2O60811 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF2O60811 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.8■□□□□ 0.6
PRAMEF2O60811 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.8■□□□□ 0.6
PRAMEF2O60811 AC142381.4-202ENST00000563973 229 ntBASIC18.8■□□□□ 0.6
PRAMEF2O60811 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF2O60811 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF2O60811 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF2O60811 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF2O60811 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF2O60811 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF2O60811 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF2O60811 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms