Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCN1O60741 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCN1O60741 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCN1O60741 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.7■□□□□ 0.58
HCN1O60741 AC007322.3-201ENST00000426526 701 ntBASIC18.7■□□□□ 0.58
HCN1O60741 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.7■□□□□ 0.58
HCN1O60741 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.7■□□□□ 0.58
HCN1O60741 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCN1O60741 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.7■□□□□ 0.58
HCN1O60741 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.7■□□□□ 0.58
HCN1O60741 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.7■□□□□ 0.58
HCN1O60741 FP700111.2-201ENST00000619190 1892 ntBASIC18.7■□□□□ 0.58
HCN1O60741 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCN1O60741 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.7■□□□□ 0.58
HCN1O60741 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HCN1O60741 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.7■□□□□ 0.58
HCN1O60741 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCN1O60741 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCN1O60741 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
HCN1O60741 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HCN1O60741 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.69■□□□□ 0.58
HCN1O60741 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.69■□□□□ 0.58
HCN1O60741 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.69■□□□□ 0.58
HCN1O60741 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.69■□□□□ 0.58
HCN1O60741 MYC-209ENST00000641252 345 ntBASIC18.69■□□□□ 0.58
HCN1O60741 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HCN1O60741 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.69■□□□□ 0.58
HCN1O60741 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.69■□□□□ 0.58
HCN1O60741 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.69■□□□□ 0.58
HCN1O60741 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCN1O60741 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.68■□□□□ 0.58
HCN1O60741 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HCN1O60741 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HCN1O60741 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 LSM12P1-201ENST00000411836 588 ntBASIC18.68■□□□□ 0.58
HCN1O60741 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.68■□□□□ 0.58
HCN1O60741 AC091874.3-201ENST00000512672 1195 ntBASIC18.68■□□□□ 0.58
HCN1O60741 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.68■□□□□ 0.58
HCN1O60741 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.68■□□□□ 0.58
HCN1O60741 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.68■□□□□ 0.58
HCN1O60741 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.68■□□□□ 0.58
HCN1O60741 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
HCN1O60741 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCN1O60741 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.68■□□□□ 0.58
HCN1O60741 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
HCN1O60741 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HCN1O60741 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HCN1O60741 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HCN1O60741 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
HCN1O60741 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.67■□□□□ 0.58
HCN1O60741 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HCN1O60741 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HCN1O60741 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.67■□□□□ 0.58
HCN1O60741 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HCN1O60741 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.67■□□□□ 0.58
HCN1O60741 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.67■□□□□ 0.58
HCN1O60741 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HCN1O60741 TSPY20P-201ENST00000450910 630 ntBASIC18.67■□□□□ 0.58
HCN1O60741 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.67■□□□□ 0.58
HCN1O60741 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.67■□□□□ 0.58
HCN1O60741 CYP2T3P-201ENST00000601990 817 ntBASIC18.67■□□□□ 0.58
HCN1O60741 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 TMEM191A-211ENST00000637163 1067 ntBASIC18.67■□□□□ 0.58
HCN1O60741 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.67■□□□□ 0.58
HCN1O60741 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HCN1O60741 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCN1O60741 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms