Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.1■□□□□ 0.49
ZIC3O60481 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ZIC3O60481 PRORSD1P-201ENST00000295112 541 ntBASIC18.1■□□□□ 0.49
ZIC3O60481 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZIC3O60481 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZIC3O60481 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.1■□□□□ 0.49
ZIC3O60481 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.1■□□□□ 0.49
ZIC3O60481 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZIC3O60481 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZIC3O60481 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.1■□□□□ 0.49
ZIC3O60481 AC233263.1-201ENST00000578059 224 ntBASIC18.1■□□□□ 0.49
ZIC3O60481 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.1■□□□□ 0.49
ZIC3O60481 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ZIC3O60481 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZIC3O60481 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZIC3O60481 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZIC3O60481 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZIC3O60481 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZIC3O60481 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZIC3O60481 GABARAPL3-202ENST00000624044 1851 ntBASIC18.09■□□□□ 0.49
ZIC3O60481 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZIC3O60481 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.09■□□□□ 0.49
ZIC3O60481 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.09■□□□□ 0.49
ZIC3O60481 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.09■□□□□ 0.49
ZIC3O60481 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZIC3O60481 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZIC3O60481 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZIC3O60481 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.09■□□□□ 0.49
ZIC3O60481 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.09■□□□□ 0.49
ZIC3O60481 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
ZIC3O60481 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZIC3O60481 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZIC3O60481 PKD1P6-201ENST00000343738 4769 ntBASIC18.09■□□□□ 0.49
ZIC3O60481 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZIC3O60481 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZIC3O60481 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZIC3O60481 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.08■□□□□ 0.49
ZIC3O60481 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZIC3O60481 AC092667.1-201ENST00000434301 2586 ntBASIC18.08■□□□□ 0.49
ZIC3O60481 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZIC3O60481 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
ZIC3O60481 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
ZIC3O60481 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.08■□□□□ 0.48
ZIC3O60481 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ZIC3O60481 RPS2P52-201ENST00000469610 820 ntBASIC18.08■□□□□ 0.48
ZIC3O60481 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.08■□□□□ 0.48
ZIC3O60481 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
ZIC3O60481 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.08■□□□□ 0.48
ZIC3O60481 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.08■□□□□ 0.48
ZIC3O60481 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.08■□□□□ 0.48
ZIC3O60481 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ZIC3O60481 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZIC3O60481 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.08■□□□□ 0.48
ZIC3O60481 AL512408.1-201ENST00000569378 2000 ntBASIC18.08■□□□□ 0.48
ZIC3O60481 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ZIC3O60481 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 AL162377.1-201ENST00000618844 1793 ntBASIC18.07■□□□□ 0.48
ZIC3O60481 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.07■□□□□ 0.48
ZIC3O60481 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ZIC3O60481 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.07■□□□□ 0.48
ZIC3O60481 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.07■□□□□ 0.48
ZIC3O60481 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ZIC3O60481 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.07■□□□□ 0.48
ZIC3O60481 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.07■□□□□ 0.48
ZIC3O60481 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.07■□□□□ 0.48
ZIC3O60481 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.07■□□□□ 0.48
ZIC3O60481 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.07■□□□□ 0.48
ZIC3O60481 AC069544.1-201ENST00000609399 999 ntBASIC18.07■□□□□ 0.48
ZIC3O60481 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.07■□□□□ 0.48
ZIC3O60481 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ZIC3O60481 AL157384.1-201ENST00000445995 2473 ntBASIC18.07■□□□□ 0.48
ZIC3O60481 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZIC3O60481 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.07■□□□□ 0.48
ZIC3O60481 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ZIC3O60481 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.06■□□□□ 0.48
ZIC3O60481 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZIC3O60481 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms