Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.98■□□□□ 0.63
URB1O60287 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 LINC01238-205ENST00000567549 1107 ntBASIC18.98■□□□□ 0.63
URB1O60287 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
URB1O60287 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.98■□□□□ 0.63
URB1O60287 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
URB1O60287 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.97■□□□□ 0.63
URB1O60287 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
URB1O60287 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
URB1O60287 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
URB1O60287 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
URB1O60287 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
URB1O60287 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
URB1O60287 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
URB1O60287 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
URB1O60287 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.97■□□□□ 0.63
URB1O60287 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.97■□□□□ 0.63
URB1O60287 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
URB1O60287 AC004264.1-201ENST00000608354 794 ntBASIC18.97■□□□□ 0.63
URB1O60287 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.97■□□□□ 0.63
URB1O60287 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
URB1O60287 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
URB1O60287 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
URB1O60287 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
URB1O60287 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
URB1O60287 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.96■□□□□ 0.63
URB1O60287 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.96■□□□□ 0.63
URB1O60287 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
URB1O60287 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
URB1O60287 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
URB1O60287 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
URB1O60287 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.96■□□□□ 0.63
URB1O60287 AC026396.1-201ENST00000419388 421 ntBASIC18.96■□□□□ 0.63
URB1O60287 AC063952.2-201ENST00000498792 1227 ntBASIC18.96■□□□□ 0.63
URB1O60287 AC022616.7-201ENST00000525383 220 ntBASIC18.96■□□□□ 0.63
URB1O60287 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.96■□□□□ 0.63
URB1O60287 AC006011.2-201ENST00000621313 1158 ntBASIC18.96■□□□□ 0.63
URB1O60287 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.96■□□□□ 0.63
URB1O60287 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.96■□□□□ 0.63
URB1O60287 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
URB1O60287 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
URB1O60287 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
URB1O60287 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.62
URB1O60287 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.95■□□□□ 0.62
URB1O60287 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.95■□□□□ 0.62
URB1O60287 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.95■□□□□ 0.62
URB1O60287 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.95■□□□□ 0.62
URB1O60287 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 ATP5G1P1-201ENST00000448724 379 ntBASIC18.95■□□□□ 0.62
URB1O60287 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.95■□□□□ 0.62
URB1O60287 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
URB1O60287 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.95■□□□□ 0.62
URB1O60287 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
URB1O60287 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
URB1O60287 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
URB1O60287 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.94■□□□□ 0.62
URB1O60287 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.94■□□□□ 0.62
URB1O60287 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.94■□□□□ 0.62
URB1O60287 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.94■□□□□ 0.62
URB1O60287 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.94■□□□□ 0.62
URB1O60287 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
URB1O60287 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.94■□□□□ 0.62
URB1O60287 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.94■□□□□ 0.62
URB1O60287 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.94■□□□□ 0.62
URB1O60287 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.94■□□□□ 0.62
URB1O60287 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
URB1O60287 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.93■□□□□ 0.62
URB1O60287 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.93■□□□□ 0.62
URB1O60287 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
URB1O60287 AL031133.1-201ENST00000406807 723 ntBASIC18.93■□□□□ 0.62
URB1O60287 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.93■□□□□ 0.62
URB1O60287 KSR1P1-201ENST00000446298 240 ntBASIC18.93■□□□□ 0.62
URB1O60287 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.93■□□□□ 0.62
URB1O60287 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.93■□□□□ 0.62
URB1O60287 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms