Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.81■■□□□ 1.08
EXTL3O43909 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EXTL3O43909 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
EXTL3O43909 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EXTL3O43909 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
EXTL3O43909 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EXTL3O43909 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.8■■□□□ 1.08
EXTL3O43909 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
EXTL3O43909 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
EXTL3O43909 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.8■■□□□ 1.08
EXTL3O43909 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.8■■□□□ 1.08
EXTL3O43909 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
EXTL3O43909 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.8■■□□□ 1.08
EXTL3O43909 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
EXTL3O43909 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EXTL3O43909 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.8■■□□□ 1.08
EXTL3O43909 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
EXTL3O43909 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.8■■□□□ 1.08
EXTL3O43909 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.79■■□□□ 1.08
EXTL3O43909 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.79■■□□□ 1.08
EXTL3O43909 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXTL3O43909 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXTL3O43909 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.79■■□□□ 1.08
EXTL3O43909 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EXTL3O43909 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
EXTL3O43909 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXTL3O43909 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.79■■□□□ 1.08
EXTL3O43909 UNC93B5-201ENST00000530315 699 ntBASIC21.79■■□□□ 1.08
EXTL3O43909 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.79■■□□□ 1.08
EXTL3O43909 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
EXTL3O43909 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXTL3O43909 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
EXTL3O43909 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
EXTL3O43909 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXTL3O43909 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EXTL3O43909 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXTL3O43909 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.79■■□□□ 1.08
EXTL3O43909 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXTL3O43909 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.78■■□□□ 1.08
EXTL3O43909 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.78■■□□□ 1.08
EXTL3O43909 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.78■■□□□ 1.08
EXTL3O43909 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.78■■□□□ 1.08
EXTL3O43909 FAM201B-201ENST00000458407 597 ntBASIC21.78■■□□□ 1.08
EXTL3O43909 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.78■■□□□ 1.08
EXTL3O43909 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.78■■□□□ 1.08
EXTL3O43909 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.78■■□□□ 1.08
EXTL3O43909 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.78■■□□□ 1.08
EXTL3O43909 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
EXTL3O43909 AC006557.6-201ENST00000623071 864 ntBASIC21.78■■□□□ 1.08
EXTL3O43909 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.78■■□□□ 1.08
EXTL3O43909 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.78■■□□□ 1.08
EXTL3O43909 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXTL3O43909 BX119927.1-201ENST00000636596 1552 ntBASIC21.78■■□□□ 1.08
EXTL3O43909 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EXTL3O43909 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
EXTL3O43909 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
EXTL3O43909 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.77■■□□□ 1.08
EXTL3O43909 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EXTL3O43909 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EXTL3O43909 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EXTL3O43909 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.77■■□□□ 1.08
EXTL3O43909 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.77■■□□□ 1.08
EXTL3O43909 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.77■■□□□ 1.08
EXTL3O43909 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
EXTL3O43909 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.77■■□□□ 1.08
EXTL3O43909 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.77■■□□□ 1.08
EXTL3O43909 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
EXTL3O43909 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
EXTL3O43909 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EXTL3O43909 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.77■■□□□ 1.08
EXTL3O43909 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EXTL3O43909 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
EXTL3O43909 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
EXTL3O43909 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
EXTL3O43909 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EXTL3O43909 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms