Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ3O43525 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ3O43525 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ3O43525 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ3O43525 AC007225.1-201ENST00000566331 1836 ntBASIC25.89■■□□□ 1.74
KCNQ3O43525 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
KCNQ3O43525 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.89■■□□□ 1.74
KCNQ3O43525 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.89■■□□□ 1.74
KCNQ3O43525 REXO1L12P-201ENST00000622156 912 ntBASIC25.89■■□□□ 1.74
KCNQ3O43525 AC073912.3-201ENST00000624414 853 ntBASIC25.89■■□□□ 1.74
KCNQ3O43525 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.89■■□□□ 1.74
KCNQ3O43525 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
KCNQ3O43525 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.89■■□□□ 1.73
KCNQ3O43525 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
KCNQ3O43525 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ3O43525 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ3O43525 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.88■■□□□ 1.73
KCNQ3O43525 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
KCNQ3O43525 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
KCNQ3O43525 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.88■■□□□ 1.73
KCNQ3O43525 NBPF21P-201ENST00000425093 1451 ntBASIC25.88■■□□□ 1.73
KCNQ3O43525 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ3O43525 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.88■■□□□ 1.73
KCNQ3O43525 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.88■■□□□ 1.73
KCNQ3O43525 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.88■■□□□ 1.73
KCNQ3O43525 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
KCNQ3O43525 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KCNQ3O43525 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ3O43525 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ3O43525 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ3O43525 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ3O43525 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ3O43525 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.87■■□□□ 1.73
KCNQ3O43525 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.87■■□□□ 1.73
KCNQ3O43525 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.87■■□□□ 1.73
KCNQ3O43525 BX088651.1-201ENST00000540551 451 ntBASIC25.87■■□□□ 1.73
KCNQ3O43525 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.87■■□□□ 1.73
KCNQ3O43525 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ3O43525 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
KCNQ3O43525 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ3O43525 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KCNQ3O43525 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ3O43525 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
KCNQ3O43525 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ3O43525 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
KCNQ3O43525 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ3O43525 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ3O43525 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ3O43525 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.86■■□□□ 1.73
KCNQ3O43525 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ3O43525 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
KCNQ3O43525 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.86■■□□□ 1.73
KCNQ3O43525 AL031963.3-201ENST00000606441 850 ntBASIC25.86■■□□□ 1.73
KCNQ3O43525 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ3O43525 AC007375.3-201ENST00000600936 2314 ntBASIC25.86■■□□□ 1.73
KCNQ3O43525 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ3O43525 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNQ3O43525 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.86■■□□□ 1.73
KCNQ3O43525 HTR7P1-201ENST00000538670 1336 ntBASIC25.86■■□□□ 1.73
KCNQ3O43525 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ3O43525 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ3O43525 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ3O43525 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
KCNQ3O43525 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
KCNQ3O43525 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ3O43525 DPP3P2-201ENST00000416030 1696 ntBASIC25.85■■□□□ 1.73
KCNQ3O43525 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ3O43525 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ3O43525 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.85■■□□□ 1.73
KCNQ3O43525 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.85■■□□□ 1.73
KCNQ3O43525 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.85■■□□□ 1.73
KCNQ3O43525 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ3O43525 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.85■■□□□ 1.73
KCNQ3O43525 AL355075.4-201ENST00000554988 638 ntBASIC25.85■■□□□ 1.73
KCNQ3O43525 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.85■■□□□ 1.73
KCNQ3O43525 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.85■■□□□ 1.73
KCNQ3O43525 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ3O43525 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNQ3O43525 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.85■■□□□ 1.73
KCNQ3O43525 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.85■■□□□ 1.73
KCNQ3O43525 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.84■■□□□ 1.73
KCNQ3O43525 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.84■■□□□ 1.73
KCNQ3O43525 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.84■■□□□ 1.73
KCNQ3O43525 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.84■■□□□ 1.73
KCNQ3O43525 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ3O43525 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ3O43525 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ3O43525 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ3O43525 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.84■■□□□ 1.73
KCNQ3O43525 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.84■■□□□ 1.73
KCNQ3O43525 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ3O43525 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNQ3O43525 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.84■■□□□ 1.73
KCNQ3O43525 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.83■■□□□ 1.73
KCNQ3O43525 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
KCNQ3O43525 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
KCNQ3O43525 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
KCNQ3O43525 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.83■■□□□ 1.73
KCNQ3O43525 KRT8P17-201ENST00000453110 1448 ntBASIC25.83■■□□□ 1.73
KCNQ3O43525 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms