Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.97■□□□□ 0.79
PHGDHO43175 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHGDHO43175 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHGDHO43175 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.96■□□□□ 0.79
PHGDHO43175 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHGDHO43175 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHGDHO43175 AC137761.2-201ENST00000561729 223 ntBASIC19.96■□□□□ 0.79
PHGDHO43175 AC145350.3-201ENST00000569033 163 ntBASIC19.96■□□□□ 0.79
PHGDHO43175 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.96■□□□□ 0.79
PHGDHO43175 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PHGDHO43175 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
PHGDHO43175 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
PHGDHO43175 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHGDHO43175 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PHGDHO43175 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
PHGDHO43175 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PHGDHO43175 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PHGDHO43175 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PHGDHO43175 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 PGM5P4-201ENST00000421970 445 ntBASIC19.95■□□□□ 0.78
PHGDHO43175 KRT18P5-201ENST00000436075 1291 ntBASIC19.95■□□□□ 0.78
PHGDHO43175 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.95■□□□□ 0.78
PHGDHO43175 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PHGDHO43175 MFSD11-216ENST00000590393 1141 ntBASIC19.95■□□□□ 0.78
PHGDHO43175 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PHGDHO43175 AC013268.1-206ENST00000638368 961 ntBASIC19.95■□□□□ 0.78
PHGDHO43175 AC112229.1-201ENST00000639295 961 ntBASIC19.95■□□□□ 0.78
PHGDHO43175 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PHGDHO43175 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PHGDHO43175 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PHGDHO43175 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHGDHO43175 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHGDHO43175 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHGDHO43175 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.94■□□□□ 0.78
PHGDHO43175 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.94■□□□□ 0.78
PHGDHO43175 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.94■□□□□ 0.78
PHGDHO43175 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PHGDHO43175 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PHGDHO43175 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.94■□□□□ 0.78
PHGDHO43175 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHGDHO43175 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PHGDHO43175 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHGDHO43175 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.94■□□□□ 0.78
PHGDHO43175 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
PHGDHO43175 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PHGDHO43175 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PHGDHO43175 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PHGDHO43175 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
PHGDHO43175 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.93■□□□□ 0.78
PHGDHO43175 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.93■□□□□ 0.78
PHGDHO43175 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.93■□□□□ 0.78
PHGDHO43175 AC007322.4-201ENST00000509611 723 ntBASIC19.93■□□□□ 0.78
PHGDHO43175 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
PHGDHO43175 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.93■□□□□ 0.78
PHGDHO43175 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.93■□□□□ 0.78
PHGDHO43175 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.93■□□□□ 0.78
PHGDHO43175 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PHGDHO43175 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHGDHO43175 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHGDHO43175 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHGDHO43175 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHGDHO43175 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
PHGDHO43175 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHGDHO43175 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.92■□□□□ 0.78
PHGDHO43175 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHGDHO43175 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.92■□□□□ 0.78
PHGDHO43175 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.92■□□□□ 0.78
PHGDHO43175 KRT18P11-201ENST00000435214 1283 ntBASIC19.92■□□□□ 0.78
PHGDHO43175 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.92■□□□□ 0.78
PHGDHO43175 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.92■□□□□ 0.78
PHGDHO43175 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PHGDHO43175 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHGDHO43175 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.92■□□□□ 0.78
PHGDHO43175 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHGDHO43175 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PHGDHO43175 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHGDHO43175 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHGDHO43175 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.92■□□□□ 0.78
PHGDHO43175 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms