Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA4O00629 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA4O00629 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA4O00629 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA4O00629 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KPNA4O00629 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.71■□□□□ 0.59
KPNA4O00629 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KPNA4O00629 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.7■□□□□ 0.58
KPNA4O00629 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KPNA4O00629 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KPNA4O00629 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.7■□□□□ 0.58
KPNA4O00629 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.7■□□□□ 0.58
KPNA4O00629 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.7■□□□□ 0.58
KPNA4O00629 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.7■□□□□ 0.58
KPNA4O00629 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.7■□□□□ 0.58
KPNA4O00629 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.7■□□□□ 0.58
KPNA4O00629 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.7■□□□□ 0.58
KPNA4O00629 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.7■□□□□ 0.58
KPNA4O00629 AC004854.2-201ENST00000608450 1441 ntBASIC18.7■□□□□ 0.58
KPNA4O00629 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.7■□□□□ 0.58
KPNA4O00629 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KPNA4O00629 AP000974.1-201ENST00000623909 2387 ntBASIC18.7■□□□□ 0.58
KPNA4O00629 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.7■□□□□ 0.58
KPNA4O00629 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.7■□□□□ 0.58
KPNA4O00629 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.7■□□□□ 0.58
KPNA4O00629 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
KPNA4O00629 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KPNA4O00629 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.7■□□□□ 0.58
KPNA4O00629 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.69■□□□□ 0.58
KPNA4O00629 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.69■□□□□ 0.58
KPNA4O00629 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 AC112907.3-201ENST00000577781 2400 ntBASIC18.69■□□□□ 0.58
KPNA4O00629 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.69■□□□□ 0.58
KPNA4O00629 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.69■□□□□ 0.58
KPNA4O00629 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.69■□□□□ 0.58
KPNA4O00629 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KPNA4O00629 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.69■□□□□ 0.58
KPNA4O00629 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KPNA4O00629 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KPNA4O00629 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.69■□□□□ 0.58
KPNA4O00629 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KPNA4O00629 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.69■□□□□ 0.58
KPNA4O00629 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.68■□□□□ 0.58
KPNA4O00629 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KPNA4O00629 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.68■□□□□ 0.58
KPNA4O00629 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.68■□□□□ 0.58
KPNA4O00629 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.68■□□□□ 0.58
KPNA4O00629 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.68■□□□□ 0.58
KPNA4O00629 AC005082.1-201ENST00000413042 2259 ntBASIC18.68■□□□□ 0.58
KPNA4O00629 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KPNA4O00629 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.68■□□□□ 0.58
KPNA4O00629 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.68■□□□□ 0.58
KPNA4O00629 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.68■□□□□ 0.58
KPNA4O00629 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KPNA4O00629 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.68■□□□□ 0.58
KPNA4O00629 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KPNA4O00629 AL512408.1-201ENST00000569378 2000 ntBASIC18.67■□□□□ 0.58
KPNA4O00629 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KPNA4O00629 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.67■□□□□ 0.58
KPNA4O00629 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms