Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
UPK1AO00322 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UPK1AO00322 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
UPK1AO00322 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.05■□□□□ 0.64
UPK1AO00322 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 AC092720.2-201ENST00000602388 1665 ntBASIC19.05■□□□□ 0.64
UPK1AO00322 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1AO00322 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
UPK1AO00322 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 KRT8P36-201ENST00000489121 1440 ntBASIC19.04■□□□□ 0.64
UPK1AO00322 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1AO00322 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1AO00322 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1AO00322 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.04■□□□□ 0.64
UPK1AO00322 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.04■□□□□ 0.64
UPK1AO00322 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1AO00322 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1AO00322 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UPK1AO00322 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.04■□□□□ 0.64
UPK1AO00322 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1AO00322 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1AO00322 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1AO00322 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
UPK1AO00322 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
UPK1AO00322 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1AO00322 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1AO00322 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1AO00322 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.03■□□□□ 0.64
UPK1AO00322 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.03■□□□□ 0.64
UPK1AO00322 AC007322.1-201ENST00000426983 750 ntBASIC19.03■□□□□ 0.64
UPK1AO00322 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.03■□□□□ 0.64
UPK1AO00322 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.03■□□□□ 0.64
UPK1AO00322 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
UPK1AO00322 RARRES2P4-201ENST00000514074 484 ntBASIC19.03■□□□□ 0.64
UPK1AO00322 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
UPK1AO00322 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.03■□□□□ 0.64
UPK1AO00322 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.03■□□□□ 0.64
UPK1AO00322 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
UPK1AO00322 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1AO00322 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.03■□□□□ 0.64
UPK1AO00322 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1AO00322 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1AO00322 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1AO00322 CYP21A1P-202ENST00000354927 1481 ntBASIC19.03■□□□□ 0.64
UPK1AO00322 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
UPK1AO00322 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1AO00322 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UPK1AO00322 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1AO00322 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1AO00322 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1AO00322 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1AO00322 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
UPK1AO00322 AC004911.1-201ENST00000416316 871 ntBASIC19.02■□□□□ 0.64
UPK1AO00322 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.02■□□□□ 0.64
UPK1AO00322 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.02■□□□□ 0.64
UPK1AO00322 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1AO00322 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPK1AO00322 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.02■□□□□ 0.63
UPK1AO00322 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
UPK1AO00322 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPK1AO00322 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
UPK1AO00322 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPK1AO00322 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1AO00322 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1AO00322 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1AO00322 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1AO00322 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UPK1AO00322 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.01■□□□□ 0.63
UPK1AO00322 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.01■□□□□ 0.63
UPK1AO00322 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.01■□□□□ 0.63
UPK1AO00322 AL137784.2-201ENST00000607332 1000 ntBASIC19.01■□□□□ 0.63
UPK1AO00322 AC080038.1-201ENST00000611274 1154 ntBASIC19.01■□□□□ 0.63
UPK1AO00322 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.01■□□□□ 0.63
UPK1AO00322 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1AO00322 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
UPK1AO00322 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1AO00322 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.01■□□□□ 0.63
UPK1AO00322 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1AO00322 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1AO00322 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UPK1AO00322 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPK1AO00322 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPK1AO00322 AC087633.2-202ENST00000565166 1439 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms