Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 IRS3P-201ENST00000223076 1006 ntBASIC18.54■□□□□ 0.56
TNFRSF11BO00300 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.53■□□□□ 0.56
TNFRSF11BO00300 AC104187.1-201ENST00000607510 612 ntBASIC18.53■□□□□ 0.56
TNFRSF11BO00300 FAM21FP-204ENST00000608637 956 ntBASIC18.53■□□□□ 0.56
TNFRSF11BO00300 AC110285.6-201ENST00000617652 491 ntBASIC18.53■□□□□ 0.56
TNFRSF11BO00300 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
TNFRSF11BO00300 TREX1-205ENST00000625293 1783 ntBASIC18.53■□□□□ 0.56
TNFRSF11BO00300 AC093484.2-201ENST00000580996 2166 ntBASIC18.52■□□□□ 0.56
TNFRSF11BO00300 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 AC091799.1-201ENST00000422823 811 ntBASIC18.52■□□□□ 0.56
TNFRSF11BO00300 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 AP001160.3-201ENST00000601484 763 ntBASIC18.52■□□□□ 0.56
TNFRSF11BO00300 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNFRSF11BO00300 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
TNFRSF11BO00300 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFRSF11BO00300 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFRSF11BO00300 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 TNXA-203ENST00000507684 2038 ntBASIC18.51■□□□□ 0.55
TNFRSF11BO00300 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 AC138932.1-201ENST00000534164 6830 ntBASIC18.51■□□□□ 0.55
TNFRSF11BO00300 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFRSF11BO00300 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms