Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H3BM21 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H3BM21 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
H3BM21 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
H3BM21 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H3BM21 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.98■□□□□ 0.79
H3BM21 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.98■□□□□ 0.79
H3BM21 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.98■□□□□ 0.79
H3BM21 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
H3BM21 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
H3BM21 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.98■□□□□ 0.79
H3BM21 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.98■□□□□ 0.79
H3BM21 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H3BM21 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
H3BM21 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
H3BM21 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.97■□□□□ 0.79
H3BM21 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
H3BM21 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.97■□□□□ 0.79
H3BM21 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.97■□□□□ 0.79
H3BM21 AC005829.2-201ENST00000571422 1056 ntBASIC19.97■□□□□ 0.79
H3BM21 AC233263.1-201ENST00000578059 224 ntBASIC19.97■□□□□ 0.79
H3BM21 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.97■□□□□ 0.79
H3BM21 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
H3BM21 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
H3BM21 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3BM21 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.96■□□□□ 0.79
H3BM21 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3BM21 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3BM21 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3BM21 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3BM21 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3BM21 AL596275.1-201ENST00000423464 877 ntBASIC19.96■□□□□ 0.79
H3BM21 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.96■□□□□ 0.79
H3BM21 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3BM21 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3BM21 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3BM21 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
H3BM21 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.95■□□□□ 0.78
H3BM21 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.95■□□□□ 0.78
H3BM21 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.95■□□□□ 0.78
H3BM21 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
H3BM21 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
H3BM21 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.95■□□□□ 0.78
H3BM21 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.95■□□□□ 0.78
H3BM21 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.95■□□□□ 0.78
H3BM21 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.95■□□□□ 0.78
H3BM21 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.95■□□□□ 0.78
H3BM21 AL121603.2-201ENST00000557373 2117 ntBASIC19.95■□□□□ 0.78
H3BM21 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.95■□□□□ 0.78
H3BM21 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.95■□□□□ 0.78
H3BM21 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.95■□□□□ 0.78
H3BM21 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
H3BM21 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.95■□□□□ 0.78
H3BM21 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
H3BM21 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3BM21 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
H3BM21 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
H3BM21 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3BM21 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3BM21 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
H3BM21 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3BM21 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
H3BM21 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.94■□□□□ 0.78
H3BM21 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.94■□□□□ 0.78
H3BM21 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
H3BM21 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.94■□□□□ 0.78
H3BM21 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.94■□□□□ 0.78
H3BM21 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
H3BM21 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
H3BM21 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3BM21 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.94■□□□□ 0.78
H3BM21 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3BM21 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3BM21 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3BM21 KRT8P36-201ENST00000489121 1440 ntBASIC19.93■□□□□ 0.78
H3BM21 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.93■□□□□ 0.78
H3BM21 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms