Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV9S1A1TA0A576 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 AC098818.2-201ENST00000564925 2320 ntBASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV9S1A1TA0A576 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 CYP21A1P-202ENST00000354927 1481 ntBASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV9S1A1TA0A576 AC093484.2-201ENST00000580996 2166 ntBASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 AC005332.7-201ENST00000614046 2005 ntBASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBV9S1A1TA0A576 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 BX323043.1-201ENST00000641006 1765 ntBASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 ZNRF2P3-201ENST00000424200 374 ntBASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 AL591742.1-201ENST00000604433 565 ntBASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.18■□□□□ 0.82
TCRBV9S1A1TA0A576 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 PTBP1P-201ENST00000554374 1601 ntBASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 TERF1P5-201ENST00000477545 1207 ntBASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 AL020996.1-203ENST00000536896 2307 ntBASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV9S1A1TA0A576 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV9S1A1TA0A576 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms