Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
CCDC196A0A1B0GTZ2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 AC099778.1-201ENST00000568593 1911 ntBASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CCDC196A0A1B0GTZ2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 AL355802.2-201ENST00000402069 882 ntBASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 BX119927.1-201ENST00000636596 1552 ntBASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC196A0A1B0GTZ2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC196A0A1B0GTZ2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 AC098934.4-201ENST00000564127 592 ntBASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.33■■□□□ 1.33
CCDC196A0A1B0GTZ2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCDC196A0A1B0GTZ2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CCDC196A0A1B0GTZ2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.33■■□□□ 1.32
CCDC196A0A1B0GTZ2 KRT16P6-202ENST00000425692 1426 ntBASIC23.33■■□□□ 1.32
CCDC196A0A1B0GTZ2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC196A0A1B0GTZ2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms