Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 KRT17P3-201ENST00000420566 1262 ntBASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC008687.6-201ENST00000596318 630 ntBASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
IGHV4-28A0A0C4DH34 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 AL137060.1-201ENST00000618151 2648 ntBASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
IGHV4-28A0A0C4DH34 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 POM121L13P-201ENST00000422362 380 ntBASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC023632.3-201ENST00000521633 145 ntBASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV4-28A0A0C4DH34 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms