Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRGV4A0A0C4DH28 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV4A0A0C4DH28 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRGV4A0A0C4DH28 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRGV4A0A0C4DH28 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 DUX4L16-201ENST00000555130 1264 ntBASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 HTR7P1-202ENST00000624664 4411 ntBASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRGV4A0A0C4DH28 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 PKD1P1-201ENST00000458669 6805 ntBASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRGV4A0A0C4DH28 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 AC016405.3-201ENST00000607710 860 ntBASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 AL356652.1-201ENST00000615962 565 ntBASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRGV4A0A0C4DH28 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 CYP21A1P-202ENST00000354927 1481 ntBASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRGV4A0A0C4DH28 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms