Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 AL355075.4-201ENST00000554988 638 ntBASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 CD177P1-201ENST00000606252 935 ntBASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 AC073195.1-201ENST00000607241 877 ntBASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 AC133561.5-201ENST00000635547 218 ntBASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 AC087499.1-201ENST00000418141 1075 ntBASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 AP003071.4-201ENST00000562276 1284 ntBASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV17A0A0B4J275 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 PTBP1P-201ENST00000554374 1601 ntBASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV17A0A0B4J275 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 EP400NL-214ENST00000641289 2402 ntBASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 TSPY15P-201ENST00000457163 923 ntBASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 AP002982.1-201ENST00000492365 877 ntBASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV17A0A0B4J275 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 FAM197Y1-201ENST00000421178 764 ntBASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV17A0A0B4J275 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms