Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC8.6□□□□□ -1.03
POLR2AP24928 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.6□□□□□ -1.03
POLR2AP24928 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
POLR2AP24928 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.59□□□□□ -1.03
POLR2AP24928 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
POLR2AP24928 SNORD35A-201ENST00000363389 86 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
POLR2AP24928 AC000089.1-201ENST00000424559 801 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 PPP1R8P1-201ENST00000452549 1044 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 AC009567.2-201ENST00000502989 349 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.59□□□□□ -1.03
POLR2AP24928 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.59□□□□□ -1.03
POLR2AP24928 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC8.59□□□□□ -1.03
POLR2AP24928 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC8.59□□□□□ -1.03
POLR2AP24928 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.59□□□□□ -1.03
POLR2AP24928 TOMM20P1-201ENST00000534518 427 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 AC090607.2-201ENST00000560331 695 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 EEF1B2P1-201ENST00000567221 672 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC8.59□□□□□ -1.03
POLR2AP24928 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC8.59□□□□□ -1.03
POLR2AP24928 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
POLR2AP24928 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
POLR2AP24928 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC8.59□□□□□ -1.03
POLR2AP24928 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
POLR2AP24928 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
POLR2AP24928 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.59□□□□□ -1.03
POLR2AP24928 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC8.59□□□□□ -1.03
POLR2AP24928 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
POLR2AP24928 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
POLR2AP24928 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
POLR2AP24928 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.03
POLR2AP24928 RN7SKP250-201ENST00000363924 321 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 OR7E156P-201ENST00000400303 464 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 RPL12P23-201ENST00000405880 490 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 SNORA11B-201ENST00000408175 129 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 RPLP1P10-201ENST00000413972 339 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.59□□□□□ -1.03
POLR2AP24928 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.59□□□□□ -1.03
POLR2AP24928 RPL12P21-201ENST00000472214 518 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC8.59□□□□□ -1.03
POLR2AP24928 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.59□□□□□ -1.03
POLR2AP24928 Vault.2-201ENST00000516519 98 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 IGKV2-29-201ENST00000521304 372 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.59□□□□□ -1.03
POLR2AP24928 EIF4A3P1-201ENST00000578499 647 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC8.59□□□□□ -1.03
POLR2AP24928 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.59□□□□□ -1.03
POLR2AP24928 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.59□□□□□ -1.03
POLR2AP24928 AC012676.3-201ENST00000614983 479 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 RN7SL126P-201ENST00000616400 299 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 MIR6806-201ENST00000622141 64 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.59□□□□□ -1.03
POLR2AP24928 MDH1B-201ENST00000374412 2553 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
POLR2AP24928 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC8.59□□□□□ -1.04
POLR2AP24928 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.58□□□□□ -1.04
POLR2AP24928 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
POLR2AP24928 CD28-202ENST00000374481 4526 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 PUS7L-202ENST00000416848 4364 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
POLR2AP24928 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.58□□□□□ -1.04
POLR2AP24928 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
POLR2AP24928 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
POLR2AP24928 RNA5SP232-201ENST00000364144 119 ntBASIC8.58□□□□□ -1.04
POLR2AP24928 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.58□□□□□ -1.04
POLR2AP24928 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.58□□□□□ -1.04
POLR2AP24928 GAPDHP19-201ENST00000431768 1005 ntBASIC8.58□□□□□ -1.04
POLR2AP24928 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.58□□□□□ -1.04
POLR2AP24928 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.58□□□□□ -1.04
POLR2AP24928 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.58□□□□□ -1.04
POLR2AP24928 AC013787.1-201ENST00000460165 307 ntBASIC8.58□□□□□ -1.04
POLR2AP24928 AC090680.1-201ENST00000464696 860 ntBASIC8.58□□□□□ -1.04
POLR2AP24928 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.58□□□□□ -1.04
POLR2AP24928 BTF3P1-201ENST00000522014 495 ntBASIC8.58□□□□□ -1.04
POLR2AP24928 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.58□□□□□ -1.04
POLR2AP24928 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.58□□□□□ -1.04
POLR2AP24928 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 AC073862.4-201ENST00000622982 854 ntBASIC8.58□□□□□ -1.04
POLR2AP24928 TMEM14EP-202ENST00000639378 1296 ntBASIC8.58□□□□□ -1.04
POLR2AP24928 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
POLR2AP24928 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
POLR2AP24928 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.58□□□□□ -1.04
POLR2AP24928 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms