Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
P04436 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
P04436 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
P04436 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
P04436 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
P04436 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.9□□□□□ -1.3
P04436 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
P04436 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
P04436 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
P04436 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
P04436 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.9□□□□□ -1.3
P04436 GRPEL2P2-201ENST00000421856 670 ntBASIC6.9□□□□□ -1.3
P04436 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.9□□□□□ -1.3
P04436 GTF2F2P2-201ENST00000445825 721 ntBASIC6.9□□□□□ -1.3
P04436 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
P04436 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
P04436 AC005550.2-201ENST00000476382 318 ntBASIC6.9□□□□□ -1.3
P04436 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.9□□□□□ -1.3
P04436 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC6.9□□□□□ -1.3
P04436 AC233724.10-201ENST00000510454 409 ntBASIC6.9□□□□□ -1.3
P04436 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC6.9□□□□□ -1.3
P04436 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
P04436 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC6.9□□□□□ -1.3
P04436 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
P04436 AL451085.1-201ENST00000604546 690 ntBASIC6.9□□□□□ -1.3
P04436 AC116003.3-201ENST00000612669 541 ntBASIC6.9□□□□□ -1.3
P04436 AC006335.3-201ENST00000613408 292 ntBASIC6.9□□□□□ -1.3
P04436 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.9□□□□□ -1.3
P04436 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.9□□□□□ -1.3
P04436 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
P04436 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
P04436 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
P04436 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
P04436 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
P04436 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
P04436 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
P04436 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.9□□□□□ -1.31
P04436 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
P04436 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
P04436 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
P04436 AC016831.3-201ENST00000446451 1723 ntBASIC6.9□□□□□ -1.31
P04436 EIF4BP4-201ENST00000441847 1780 ntBASIC6.9□□□□□ -1.31
P04436 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
P04436 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
P04436 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
P04436 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
P04436 AC009948.5-201ENST00000624360 4406 ntBASIC6.9□□□□□ -1.31
P04436 CREM-212ENST00000374728 1933 ntTSL 5 BASIC6.89□□□□□ -1.31
P04436 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.89□□□□□ -1.31
P04436 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.89□□□□□ -1.31
P04436 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
P04436 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 TDGF1P3-202ENST00000602699 2710 ntBASIC6.89□□□□□ -1.31
P04436 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC6.89□□□□□ -1.31
P04436 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
P04436 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.89□□□□□ -1.31
P04436 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.89□□□□□ -1.31
P04436 RPL12P10-201ENST00000413498 498 ntBASIC6.89□□□□□ -1.31
P04436 VN1R35P-201ENST00000428102 693 ntBASIC6.89□□□□□ -1.31
P04436 OR5M13P-201ENST00000433944 937 ntBASIC6.89□□□□□ -1.31
P04436 OR52U1P-201ENST00000439752 923 ntBASIC6.89□□□□□ -1.31
P04436 AC123904.1-201ENST00000441072 368 ntBASIC6.89□□□□□ -1.31
P04436 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 AL451074.4-201ENST00000447545 470 ntBASIC6.89□□□□□ -1.31
P04436 AL929410.2-201ENST00000451170 189 ntBASIC6.89□□□□□ -1.31
P04436 TAAR3P-201ENST00000466706 1078 ntBASIC6.89□□□□□ -1.31
P04436 TAAR3P-202ENST00000481759 1025 ntBASIC6.89□□□□□ -1.31
P04436 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.89□□□□□ -1.31
P04436 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC6.89□□□□□ -1.31
P04436 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC6.89□□□□□ -1.31
P04436 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.89□□□□□ -1.31
P04436 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC6.89□□□□□ -1.31
P04436 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.89□□□□□ -1.31
P04436 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.89□□□□□ -1.31
P04436 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC6.89□□□□□ -1.31
P04436 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.89□□□□□ -1.31
P04436 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 FGL2-202ENST00000637771 989 ntBASIC6.89□□□□□ -1.31
P04436 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.89□□□□□ -1.31
P04436 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
P04436 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC6.89□□□□□ -1.31
P04436 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC6.89□□□□□ -1.31
P04436 MAPK10-333ENST00000641607 2481 ntBASIC6.89□□□□□ -1.31
P04436 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
P04436 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P04436 AC011447.6-201ENST00000623510 2598 ntBASIC6.89□□□□□ -1.31
P04436 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms